RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MAGEA4P43358 317 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 GPR143P51810 404 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 STX4Q12846 297 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 BMPR2Q13873 1038 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 MED27Q6P2C8 311 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 GDF7Q7Z4P5 450 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 SULF2Q8IWU5 870 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 GPALPP1Q8IXQ4 340 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 SRRM1Q8IYB3 904 aaKnown RBP13.19□□□□□ -0.3
SNX6-210ENST00000557341 OR14A16Q8NHC5 309 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 FBF1Q8TES7 1133 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 AGAP11Q8TF27 550 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 UBTD2Q8WUN7 234 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 F2RL3Q96RI0 385 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 ATOH8Q96SQ7 321 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 TBCDQ9BTW9 1192 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 NMRAL1Q9HBL8 299 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 PRDM7Q9NQW5 492 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 OPTCQ9UBM4 332 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 ERVK-11Q9UQG0 969 aa13.19□□□□□ -0.3
SNX6-210ENST00000557341 YARS2Q9Y2Z4 477 aaKnown RBP13.19□□□□□ -0.3
SNX6-210ENST00000557341 ANKRD17O75179 2603 aaKnown RBP13.18□□□□□ -0.3
SNX6-210ENST00000557341 A8MVJ9 347 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 K7EPI3 171 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 UBXN8O00124 270 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 PEX1O43933 1283 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 PRKNO60260 465 aaPredicted RBP13.18□□□□□ -0.3
SNX6-210ENST00000557341 CTNSO60931 367 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 PCNAP12004 261 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 COX6B1P14854 86 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 PTGER1P34995 402 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 RFC3P40938 356 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 SSR2P43308 183 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 GPR85P60893 370 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 DLG1Q12959 904 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 SERTAD2Q14140 314 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 TMEM35AQ53FP2 167 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 HSDL2Q6YN16 418 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 ZNF793Q6ZN11 406 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 MDGA2Q7Z553 956 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 ISCA2Q86U28 154 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 CHERPQ8IWX8 916 aaKnown RBP13.18□□□□□ -0.3
SNX6-210ENST00000557341 LAS2Q8IYD9 372 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 ZFP62Q8NB50 900 aaPredicted RBP13.18□□□□□ -0.3
SNX6-210ENST00000557341 MORN4Q8NDC4 146 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 C16orf52Q8NHV5 167 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 ZNF473Q8WTR7 871 aaKnown RBP13.18□□□□□ -0.3
SNX6-210ENST00000557341 PHF10Q8WUB8 498 aaKnown RBP13.18□□□□□ -0.3
SNX6-210ENST00000557341 ASB15Q8WXK1 588 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 PHF12Q96QT6 1004 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 TIMMDC1Q9NPL8 285 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 HPF1Q9NWY4 346 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 MYOTQ9UBF9 498 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 VTI1BQ9UEU0 232 aa13.18□□□□□ -0.3
SNX6-210ENST00000557341 SYCE1LA8MT33 242 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 E9PLN8 166 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 ZNHIT1O43257 154 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 HS6ST1O60243 411 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 CDC40O60508 579 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNX6-210ENST00000557341 LDB3O75112 727 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 OR2J2O76002 312 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 SCELO95171 688 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 CLDN14O95500 239 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 EPB42P16452 691 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 HIST1H1TP22492 207 aaPredicted RBP13.17□□□□□ -0.3
SNX6-210ENST00000557341 ATP5A1P25705 553 aaKnown RBP13.17□□□□□ -0.3
SNX6-210ENST00000557341 ETF1P62495 437 aaKnown RBP13.17□□□□□ -0.3
SNX6-210ENST00000557341 AP5B1Q2VPB7 878 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 GRHL2Q6ISB3 625 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 ZDHHC24Q6UX98 284 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 CHSY3Q70JA7 882 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 CCDC91Q7Z6B0 441 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 DOLPP1Q86YN1 238 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 ACOT4Q8N9L9 421 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 PSD4Q8NDX1 1056 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 C7orf57Q8NEG2 295 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 CMTM7Q96FZ5 175 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 RASL10BQ96S79 203 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 MAPKAP1Q9BPZ7 522 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 VKORC1Q9BQB6 163 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 ALOXE3Q9BYJ1 711 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 OR8D2Q9GZM6 311 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 IGSF5Q9NSI5 407 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 KCMF1Q9P0J7 381 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 COPS7AQ9UBW8 275 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 ACOT9Q9Y305 439 aa13.17□□□□□ -0.3
SNX6-210ENST00000557341 A0A087X1B8 175 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 A0A1B0GTH9 108 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 TMEM200CA6NKL6 621 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 C17orf105B2RV13 164 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 RTCAO00442 366 aaKnown RBP13.16□□□□□ -0.3
SNX6-210ENST00000557341 TGFB1P01137 390 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 TPOP07202 933 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 TNNI3P19429 210 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 PTGS2P35354 604 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 SOX3P41225 446 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 RAP1GDS1P52306 607 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 HK2P52789 917 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 PCDH1Q08174 1060 aa13.16□□□□□ -0.3
SNX6-210ENST00000557341 DDX39BQ13838 428 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms