RNA–Protein interactions for RNA: ENST00000557092.5

NEDD1-209, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-209ENST00000557092 VMP1Q96GC9 406 aa17.19■□□□□ 0.34
NEDD1-209ENST00000557092 MTERF1Q99551 399 aaKnown RBP17.19■□□□□ 0.34
NEDD1-209ENST00000557092 CCDC77Q9BR77 488 aa17.19■□□□□ 0.34
NEDD1-209ENST00000557092 SORBS1Q9BX66 1292 aaKnown RBP17.19■□□□□ 0.34
NEDD1-209ENST00000557092 ZNF180Q9UJW8 692 aa17.19■□□□□ 0.34
NEDD1-209ENST00000557092 PCDHGB6Q9Y5F9 930 aa17.19■□□□□ 0.34
NEDD1-209ENST00000557092 CLDN16Q9Y5I7 305 aa17.19■□□□□ 0.34
NEDD1-209ENST00000557092 UGDHO60701 494 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 CTNSO60931 367 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 SMIM24O75264 130 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 NEURL1O76050 574 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 UNC5CO95185 931 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 RHOXF2BP0C7M4 288 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 CPN2P22792 545 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 MST1P26927 711 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 PIK3CBP42338 1070 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 CYB561P49447 251 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 PER3P56645 1201 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 RPS13P62277 151 aaKnown RBP17.18■□□□□ 0.34
NEDD1-209ENST00000557092 ELAVL1Q15717 326 aaKnown RBP17.18■□□□□ 0.34
NEDD1-209ENST00000557092 CPSF6Q16630 551 aaKnown RBP eCLIP17.18■□□□□ 0.34
NEDD1-209ENST00000557092 DEPDC1Q5TB30 811 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 OR4C11Q6IEV9 310 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 SLC25A25Q6KCM7 469 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 GALNTL5Q7Z4T8 443 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 TMEM132CQ8N3T6 1108 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 FAM98AQ8NCA5 519 aaKnown RBP17.18■□□□□ 0.34
NEDD1-209ENST00000557092 RGMAQ96B86 450 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 SCMH1Q96GD3 660 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 RHOXF2Q9BQY4 288 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 ALOXE3Q9BYJ1 711 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 KCMF1Q9P0J7 381 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 SEC14L3Q9UDX4 400 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 TMCO1Q9UM00 188 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 RNF11Q9Y3C5 154 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 CLCA3PQ9Y6N3 262 aa17.18■□□□□ 0.34
NEDD1-209ENST00000557092 CDK2AP1O14519 115 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 LDB3O75112 727 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 UTP20O75691 2785 aaKnown RBP17.17■□□□□ 0.34
NEDD1-209ENST00000557092 SLC25A12O75746 678 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 SCELO95171 688 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 SP1P08047 785 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 SNRPAP09012 282 aaKnown RBP17.17■□□□□ 0.34
NEDD1-209ENST00000557092 COL6A2P12110 1019 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 TNNI3P19429 210 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 CCNG1P51959 295 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 ID2Q02363 134 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 SLAMF1Q13291 335 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 MAPKAPK3Q16644 382 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 HIST2H2BCQ6DN03 193 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 METTL2BQ6P1Q9 378 aaKnown RBP17.17■□□□□ 0.34
NEDD1-209ENST00000557092 TMEM125Q96AQ2 219 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 NOL11Q9H8H0 719 aaKnown RBP17.17■□□□□ 0.34
NEDD1-209ENST00000557092 SPTBN1Q01082 2364 aaKnown RBP17.17■□□□□ 0.34
NEDD1-209ENST00000557092 ICE1Q9Y2F5 2266 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 ZGRF1Q86YA3 2104 aa17.17■□□□□ 0.34
NEDD1-209ENST00000557092 WIPF3A6NGB9 483 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 H0YIV9 168 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 STX16-NPEPL1H3BU86 382 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 PLPP1O14494 284 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 STX16O14662 325 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 ZFAND5O76080 213 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 CLDN9O95484 217 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 STSP08842 583 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 ABHD2P08910 425 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 HLCSP50747 726 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 ALDH6A1Q02252 535 aaKnown RBP17.16■□□□□ 0.34
NEDD1-209ENST00000557092 SERTAD2Q14140 314 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 ZRSR2Q15696 482 aaKnown RBP17.16■□□□□ 0.34
NEDD1-209ENST00000557092 LGSNQ5TDP6 509 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 C1QL3Q5VWW1 255 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 TRMT10CQ7L0Y3 403 aaKnown RBP17.16■□□□□ 0.34
NEDD1-209ENST00000557092 FJX1Q86VR8 437 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 TMEM156Q8N614 296 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 OR14A16Q8NHC5 309 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 DAZLQ92904 295 aaKnown RBP17.16■□□□□ 0.34
NEDD1-209ENST00000557092 CDK15Q96Q40 435 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 VTI1BQ9UEU0 232 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 ZNF223Q9UK11 482 aaPredicted RBP17.16■□□□□ 0.34
NEDD1-209ENST00000557092 PPIEQ9UNP9 301 aaKnown RBP17.16■□□□□ 0.34
NEDD1-209ENST00000557092 TSC22D4Q9Y3Q8 395 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 POLEQ07864 2286 aa17.16■□□□□ 0.34
NEDD1-209ENST00000557092 A0A1B0GUH1 482 aa17.15■□□□□ 0.34
NEDD1-209ENST00000557092 OR7A17O14581 309 aa17.15■□□□□ 0.34
NEDD1-209ENST00000557092 ITGA10O75578 1167 aa17.15■□□□□ 0.34
NEDD1-209ENST00000557092 MLYCDO95822 493 aa17.15■□□□□ 0.34
NEDD1-209ENST00000557092 PTX3P26022 381 aaPredicted RBP17.15■□□□□ 0.34
NEDD1-209ENST00000557092 TRHRP34981 398 aaPredicted RBP17.15■□□□□ 0.34
NEDD1-209ENST00000557092 RBPJQ06330 500 aa17.15■□□□□ 0.34
NEDD1-209ENST00000557092 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.15■□□□□ 0.34
NEDD1-209ENST00000557092 ARMC10Q8N2F6 343 aa17.15■□□□□ 0.34
NEDD1-209ENST00000557092 L3MBTL4Q8NA19 623 aa17.15■□□□□ 0.34
NEDD1-209ENST00000557092 OR52B6Q8NGF0 335 aa17.15■□□□□ 0.34
NEDD1-209ENST00000557092 SREK1Q8WXA9 508 aaKnown RBP17.15■□□□□ 0.34
NEDD1-209ENST00000557092 FRMD6Q96NE9 622 aa17.15■□□□□ 0.34
NEDD1-209ENST00000557092 MRPL57Q9BQC6 102 aaKnown RBP17.15■□□□□ 0.34
NEDD1-209ENST00000557092 OR8D2Q9GZM6 311 aa17.15■□□□□ 0.34
NEDD1-209ENST00000557092 TSPAN10Q9H1Z9 355 aaPredicted RBP17.15■□□□□ 0.34
NEDD1-209ENST00000557092 MRPL46Q9H2W6 279 aaKnown RBP17.15■□□□□ 0.34
NEDD1-209ENST00000557092 MS4A12Q9NXJ0 267 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms