RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 STX7O15400 261 aaKnown RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 SPRY1O43609 319 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 WDR1O75083 606 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 SRP72O76094 671 aaKnown RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 SEC24DO94855 1032 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 APOL3O95236 402 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 IGHG3P01860 377 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 FTLP02792 175 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 HSP90AA1P07900 732 aaKnown RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 ANXA5P08758 320 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 CD48P09326 243 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 CCDC172P0C7W6 258 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 GZMAP12544 262 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 GABRA1P14867 456 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 PAX1P15863 534 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 TCF4P15884 667 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 AGTR2P50052 363 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 ASCL1P50553 236 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 EFNA3P52797 238 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 MLF1P58340 268 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 TAS2R50P59544 299 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 XIAPP98170 497 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 ZBTB17Q13105 803 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 FAM53BQ14153 422 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 DPYSL3Q14195 570 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 KRT81Q14533 505 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 SLC1A5Q15758 541 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 TPD52L1Q16890 204 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 KRTAP24-1Q3LI83 254 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 CHRFAM7AQ494W8 412 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 TEX44Q53QW1 395 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 GARNL3Q5VVW2 1013 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 KAZNQ674X7 775 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 UBE2R2Q712K3 238 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 GLT6D1Q7Z4J2 308 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 WDR53Q7Z5U6 358 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 ANKRD37Q7Z713 158 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 PCGF5Q86SE9 256 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 MAP7D3Q8IWC1 876 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 LMNTD1Q8N9Z9 388 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 LINC01555Q8NAE3 123 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 MLKLQ8NB16 471 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 PLPP5Q8NEB5 264 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 OR5M9Q8NGP3 310 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 SPATA22Q8NHS9 363 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 LINC01560Q8TB33 94 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 ELP5Q8TE02 316 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 NAT14Q8WUY8 206 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 SMPDL3BQ92485 455 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 ULK4Q96C45 1275 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 FAF2Q96CS3 445 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 MFSD3Q96ES6 412 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 MMABQ96EY8 250 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 C10orf90Q96M02 699 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 COPS8Q99627 209 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 FICDQ9BVA6 458 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 DEFB127Q9H1M4 99 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 SERHL2Q9H4I8 314 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 ASB8Q9H765 288 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 GLOD4Q9HC38 313 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 MRPL47Q9HD33 250 aaKnown RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 STOX2Q9P2F5 926 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 C19orf25Q9UFG5 118 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 MTRF1LQ9UGC7 380 aaKnown RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 FAM153AQ9UHL3 310 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 ACAD8Q9UKU7 415 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 TDRKHQ9Y2W6 561 aaKnown RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 COX11Q9Y6N1 276 aa4.37□□□□□ -1.71
SCFD1-223ENST00000557076 PHF3Q92576 2039 aaKnown RBP4.37□□□□□ -1.71
SCFD1-223ENST00000557076 SLC5A10A0PJK1 596 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 FEZF1A0PJY2 475 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 C5orf60A6NFR6 353 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 C2orf81A6NN90 581 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 DIRC3C9JPN6 131 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 H0YGG7 62 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 PES1O00541 588 aaKnown RBP4.36□□□□□ -1.71
SCFD1-223ENST00000557076 TXNDC9O14530 226 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 EPHB6O15197 1021 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 KCNAB3O43448 404 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 BUD23O43709 281 aaKnown RBP4.36□□□□□ -1.71
SCFD1-223ENST00000557076 DNAJC8O75937 253 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-223ENST00000557076 AP2A2O94973 939 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 SOX30O94993 753 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 EIF2S1P05198 315 aaKnown RBP4.36□□□□□ -1.71
SCFD1-223ENST00000557076 FAM157CP0CG43 387 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 CDK11BP21127 795 aaKnown RBP4.36□□□□□ -1.71
SCFD1-223ENST00000557076 FPR1P21462 350 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 PKLRP30613 574 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 CEACAM8P31997 349 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-223ENST00000557076 TIMP3P35625 211 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 NR0B1P51843 470 aaKnown RBP4.36□□□□□ -1.71
SCFD1-223ENST00000557076 ARF3P61204 181 aaPredicted RBP4.36□□□□□ -1.71
SCFD1-223ENST00000557076 PPIAP62937 165 aaKnown RBP4.36□□□□□ -1.71
SCFD1-223ENST00000557076 MPP1Q00013 466 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 SORDQ00796 357 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 SLC25A11Q02978 314 aaKnown RBP4.36□□□□□ -1.71
SCFD1-223ENST00000557076 RELAQ04206 551 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 GBE1Q04446 702 aa4.36□□□□□ -1.71
SCFD1-223ENST00000557076 ACTN3Q08043 901 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms