RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 SERINC4A6NH21 518 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 GFYI3L273 518 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 UBFD1O14562 309 aaKnown RBP11.4□□□□□ -0.58
PSEN1-220ENST00000557037 CD3EAPO15446 510 aaKnown RBP11.4□□□□□ -0.58
PSEN1-220ENST00000557037 OR1F1O43749 312 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 SPOPO43791 374 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 NRDCO43847 1150 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 NDUFS7O75251 213 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 NDUFS3O75489 264 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 METTL18O95568 372 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 IFNA16P05015 189 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 ZNF16P17020 682 aaPredicted RBP11.4□□□□□ -0.58
PSEN1-220ENST00000557037 COMTP21964 271 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 ATP5DP30049 168 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 FMO4P31512 558 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 GRK3P35626 688 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 UGT2B10P36537 528 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 HNRNPFP52597 415 aaKnown RBP11.4□□□□□ -0.58
PSEN1-220ENST00000557037 TBPL1P62380 186 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 SLC13A2Q13183 592 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 GBX1Q14549 363 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 TOMM20Q15388 145 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 PHKG1Q16816 387 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 ZNF791Q3KP31 576 aaPredicted RBP11.4□□□□□ -0.58
PSEN1-220ENST00000557037 EIPR1Q53HC9 387 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 C17orf64Q86WR6 236 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 SCUBE1Q8IWY4 988 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 KLHDC8BQ8IXV7 354 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 TMEM132CQ8N3T6 1108 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 TC2NQ8N9U0 490 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 FAM13CQ8NE31 585 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 ACTL9Q8TC94 416 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 UTP15Q8TED0 518 aaKnown RBP11.4□□□□□ -0.58
PSEN1-220ENST00000557037 PAQR8Q8TEZ7 354 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 ABTB1Q969K4 478 aaPredicted RBP11.4□□□□□ -0.58
PSEN1-220ENST00000557037 TM9SF2Q99805 663 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 FAM129AQ9BZQ8 928 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 L2HGDHQ9H9P8 463 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 ADAP2Q9NPF8 381 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 CCDC177Q9NQR7 707 aaPredicted RBP11.4□□□□□ -0.58
PSEN1-220ENST00000557037 PRTFDC1Q9NRG1 225 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 CLDN16Q9Y5I7 305 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 CLCA3PQ9Y6N3 262 aa11.4□□□□□ -0.58
PSEN1-220ENST00000557037 IGHV4-30-2A0A087WSY4 118 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 APOC4-APOC2K7ER74 178 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 OVOL3O00110 214 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 MSTNO14793 375 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 TNFSF13O75888 250 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 APOC2P02655 101 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 C1QAP02745 245 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 CHRM3P20309 590 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 IMPA1P29218 277 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 TTPAP49638 278 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 CDK9P50750 372 aaKnown RBP11.39□□□□□ -0.59
PSEN1-220ENST00000557037 MTTPP55157 894 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 EIF3EP60228 445 aaKnown RBP11.39□□□□□ -0.59
PSEN1-220ENST00000557037 SRYQ05066 204 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 RPS6KA1Q15418 735 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 PIGGQ5H8A4 983 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 ZNF474Q6S9Z5 364 aaPredicted RBP11.39□□□□□ -0.59
PSEN1-220ENST00000557037 DNM1P46Q6ZS02 220 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 SH2D5Q6ZV89 423 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 BBS12Q6ZW61 710 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 REXO1L1PQ8IX06 675 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 TMEM52Q8NDY8 209 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 PPHLN1Q8NEY8 458 aaKnown RBP11.39□□□□□ -0.59
PSEN1-220ENST00000557037 OR10G3Q8NGC4 313 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 GABPB2Q8TAK5 448 aaPredicted RBP11.39□□□□□ -0.59
PSEN1-220ENST00000557037 ZPLD1Q8TCW7 415 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 AKAP1Q92667 903 aaKnown RBP eCLIP11.39□□□□□ -0.59
PSEN1-220ENST00000557037 ZFP3Q96NJ6 502 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 DOHHQ9BU89 302 aa11.39□□□□□ -0.59
PSEN1-220ENST00000557037 OPN3Q9H1Y3 402 aaPredicted RBP11.39□□□□□ -0.59
PSEN1-220ENST00000557037 C12orf65Q9H3J6 166 aaKnown RBP11.39□□□□□ -0.59
PSEN1-220ENST00000557037 EIF2B3Q9NR50 452 aaKnown RBP11.39□□□□□ -0.59
PSEN1-220ENST00000557037 A0A1W2PNV4 684 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 C16orf97H3BN30 126 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 KLF4O43474 513 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 LMX1BO60663 402 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 SOD3P08294 240 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 RBP3P10745 1247 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 POU2F1P14859 743 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 RPS3P23396 243 aaKnown RBP eCLIP11.38□□□□□ -0.59
PSEN1-220ENST00000557037 IGFBP5P24593 272 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 MARCKSL1P49006 195 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 CCZ1BP86790 482 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 CCZ1P86791 482 aaPredicted RBP11.38□□□□□ -0.59
PSEN1-220ENST00000557037 ACVR1Q04771 509 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 RGS1Q08116 209 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 PWP1Q13610 501 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 ELAVL1Q15717 326 aaKnown RBP11.38□□□□□ -0.59
PSEN1-220ENST00000557037 PARP6Q2NL67 630 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 BEX5Q5H9J7 111 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 NIPAL1Q6NVV3 410 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 CLEC17AQ6ZS10 378 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 KIAA1328Q86T90 577 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 LRRC6Q86X45 466 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 OTUD6BQ8N6M0 293 aa11.38□□□□□ -0.59
PSEN1-220ENST00000557037 OR5L2Q8NGL0 311 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms