RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 GPR19Q15760 415 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 TOR1AIP1Q5JTV8 583 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 C10orf62Q5T681 223 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 ZNF697Q5TEC3 545 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 RAB12Q6IQ22 244 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 LIN54Q6MZP7 749 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 FUT10Q6P4F1 479 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 WASH2PQ6VEQ5 465 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 RANBP3LQ86VV4 465 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 PROKR1Q8TCW9 393 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 RIT1Q92963 219 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 UBE2FQ969M7 185 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 NUS1Q96E22 293 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 YIPF6Q96EC8 236 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 PPP1R16AQ96I34 528 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 GPR78Q96P69 363 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 BHLHE41Q9C0J9 482 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 R3HDMLQ9H3Y0 253 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 C3orf14Q9HBI5 128 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 MED11Q9P086 117 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 MGAT4BQ9UQ53 548 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 PCDHGA4Q9Y5G9 962 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 CACNG2Q9Y698 323 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 RBBP6Q7Z6E9 1792 aaKnown RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 CLDN24A6NM45 220 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 ANXA2P2A6NMY6 339 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 OR2AT4A6NND4 320 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 E2F3O00716 465 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 LDB2O43679 373 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 OR10H2O60403 315 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 RFPL3O75679 317 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 PTHP01270 115 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 HIST1H2ABP04908 130 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 ANXA2P07355 339 aaKnown RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 ATXN1LP0C7T5 689 aaKnown RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 ARNTP27540 789 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 GPR4P46093 362 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 LARS2Q15031 903 aaKnown RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 OXA1LQ15070 435 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 HYAL4Q2M3T9 481 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 PROX2Q3B8N5 592 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 SCGB2B2Q4G0G5 96 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 SLC35F1Q5T1Q4 408 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 AGAP6Q5VW22 663 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 SFRP4Q6FHJ7 346 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 USP50Q70EL3 339 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 HIST3H2AQ7L7L0 130 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 VASH1Q7L8A9 365 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 RIMKLAQ8IXN7 391 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 RHOXF1Q8NHV9 184 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 KCNJ9Q92806 393 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 HIST1H2ACQ93077 130 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 CCDC115Q96NT0 180 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 AGAP4Q96P64 663 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 RBM38Q9H0Z9 239 aaKnown RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 PLAC1Q9HBJ0 212 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 NANSQ9NR45 359 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 MGAT4CQ9UBM8 478 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 TAC3Q9UHF0 121 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 FARSAQ9Y285 508 aaKnown RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 MYH14Q7Z406 1995 aaKnown RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 TRBV23OR9-2A0A075B6M9 112 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 UNC119BA6NIH7 251 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 K7ERQ8 282 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 L7N2F9 121 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 KMOO15229 486 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 COCHO43405 550 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 SERPINA3P01011 423 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 NT5EP21589 574 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 SLC19A1P41440 591 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 SEC13P55735 322 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 ZMYND11Q15326 602 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 MTFR2Q6P444 385 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 MAMDC4Q6UXC1 1216 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 NRARPQ7Z6K4 114 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 TAF8Q7Z7C8 310 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 UBQLNLQ8IYU4 475 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 FBXO22Q8NEZ5 403 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 OR51G2Q8NGK0 314 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 TNFAIP8L1Q8WVP5 186 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 AUTS2Q8WXX7 1259 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 FUZQ9BT04 418 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 HPF1Q9NWY4 346 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 IL20RAQ9UHF4 553 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 FBXO9Q9UK97 447 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 IKZF2Q9UKS7 526 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 KAT6AQ92794 2004 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 ZNF879B4DU55 563 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 LRRN3E7EW58 273 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 CAPN5O15484 640 aaPredicted RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 NDUFS4O43181 175 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 AKAP8O43823 692 aaKnown RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 NUDT7P0C024 238 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 PRKAR2AP13861 404 aaKnown RBP4.78□□□□□ -1.64
SYNE2-223ENST00000557005 GNSP15586 552 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 PRKACAP17612 351 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 SLC6A4P31645 630 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 ADH7P40394 386 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 RGS6P49758 472 aa4.78□□□□□ -1.64
SYNE2-223ENST00000557005 FADDQ13158 208 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms