RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 DAZLQ92904 295 aaKnown RBP21.02■□□□□ 0.96
ACTN1-220ENST00000556433 UBE2E3Q969T4 207 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 MTFMTQ96DP5 389 aaKnown RBP21.02■□□□□ 0.96
ACTN1-220ENST00000556433 TBCDQ9BTW9 1192 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 NMRAL1Q9HBL8 299 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 LYRM4Q9HD34 91 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 NUDT4Q9NZJ9 180 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 VTI1BQ9UEU0 232 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 ABCA12Q86UK0 2595 aa21.02■□□□□ 0.96
ACTN1-220ENST00000556433 A0A1B0GTH9 108 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 TMEM200CA6NKL6 621 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 A8MVJ9 347 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 E9PLN8 166 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 CDC40O60508 579 aaKnown RBP eCLIP21.01■□□□□ 0.95
ACTN1-220ENST00000556433 SH3BGRLO75368 114 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 OR2J2O76002 312 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 PCNAP12004 261 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 CRABP2P29373 138 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 CASQ1P31415 396 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 MAGEA4P43358 317 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 MED27Q6P2C8 311 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 HSDL2Q6YN16 418 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 ZNF793Q6ZN11 406 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 TBC1D1Q86TI0 1168 aaPredicted RBP21.01■□□□□ 0.95
ACTN1-220ENST00000556433 EID3Q8N140 333 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 ACOT4Q8N9L9 421 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 ZFP62Q8NB50 900 aaPredicted RBP21.01■□□□□ 0.95
ACTN1-220ENST00000556433 MORN4Q8NDC4 146 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 FBXO25Q8TCJ0 367 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 FBF1Q8TES7 1133 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 ASB15Q8WXK1 588 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 MAPKAP1Q9BPZ7 522 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 VKORC1Q9BQB6 163 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 MS4A8Q9BY19 250 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 HPF1Q9NWY4 346 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 MYOTQ9UBF9 498 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 LRBAP50851 2863 aa21.01■□□□□ 0.95
ACTN1-220ENST00000556433 NCOA6Q14686 2063 aaPredicted RBP21■□□□□ 0.95
ACTN1-220ENST00000556433 SUPT3HB4E1H0 165 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 WWP2O00308 870 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 RTCAO00442 366 aaKnown RBP21■□□□□ 0.95
ACTN1-220ENST00000556433 ADAM10O14672 748 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 SUPT3HO75486 399 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 TGFB1P01137 390 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 SLC35E2BP0CK96 405 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 ATP5A1P25705 553 aaKnown RBP21■□□□□ 0.95
ACTN1-220ENST00000556433 SERTAD2Q14140 314 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 E2F2Q14209 437 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 TRADDQ15628 312 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 AP5B1Q2VPB7 878 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 TMEM35AQ53FP2 167 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 CMPK2Q5EBM0 449 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 IL20RBQ6UXL0 311 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 CHSY3Q70JA7 882 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 GDF7Q7Z4P5 450 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 GPALPP1Q8IXQ4 340 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 OR14A16Q8NHC5 309 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 FAM57AQ8TBR7 257 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 PHF10Q8WUB8 498 aaKnown RBP21■□□□□ 0.95
ACTN1-220ENST00000556433 DMRTA2Q96SC8 542 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 PHACTR1Q9C0D0 580 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 OR8D2Q9GZM6 311 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 RAB17Q9H0T7 212 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 OPTCQ9UBM4 332 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 PPT2Q9UMR5 302 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 SPACA6W5XKT8 324 aa21■□□□□ 0.95
ACTN1-220ENST00000556433 C19orf84I3L1E1 186 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 K7EPI3 171 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 UBXN8O00124 270 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 LDB3O75112 727 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 PDE9AO76083 593 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 OR6B1O95007 311 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 TUBB4AP04350 444 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 TPOP07202 933 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 LTA4HP09960 611 aaKnown RBP20.99■□□□□ 0.95
ACTN1-220ENST00000556433 STX2P32856 288 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 LAS2Q8IYD9 372 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 ZNF321PQ8N8H1 164 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 PSD4Q8NDX1 1056 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 ATOH8Q96SQ7 321 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 IGSF5Q9NSI5 407 aa20.99■□□□□ 0.95
ACTN1-220ENST00000556433 C17orf105B2RV13 164 aa20.98■□□□□ 0.95
ACTN1-220ENST00000556433 SAP18O00422 153 aaKnown RBP20.98■□□□□ 0.95
ACTN1-220ENST00000556433 KERAO60938 352 aa20.98■□□□□ 0.95
ACTN1-220ENST00000556433 HIST1H1TP22492 207 aaPredicted RBP20.98■□□□□ 0.95
ACTN1-220ENST00000556433 ID2Q02363 134 aa20.98■□□□□ 0.95
ACTN1-220ENST00000556433 ZDHHC24Q6UX98 284 aa20.98■□□□□ 0.95
ACTN1-220ENST00000556433 OR7G3Q8NG95 312 aa20.98■□□□□ 0.95
ACTN1-220ENST00000556433 OR52N2Q8NGI0 321 aa20.98■□□□□ 0.95
ACTN1-220ENST00000556433 NXNL1Q96CM4 212 aa20.98■□□□□ 0.95
ACTN1-220ENST00000556433 CMTM7Q96FZ5 175 aa20.98■□□□□ 0.95
ACTN1-220ENST00000556433 RASL10BQ96S79 203 aa20.98■□□□□ 0.95
ACTN1-220ENST00000556433 DEFB127Q9H1M4 99 aa20.98■□□□□ 0.95
ACTN1-220ENST00000556433 DEPPQ9NTK1 212 aa20.98■□□□□ 0.95
ACTN1-220ENST00000556433 ACOT9Q9Y305 439 aa20.98■□□□□ 0.95
ACTN1-220ENST00000556433 CPN2P22792 545 aa20.97■□□□□ 0.95
ACTN1-220ENST00000556433 SERPINB1P30740 379 aa20.97■□□□□ 0.95
ACTN1-220ENST00000556433 SOX3P41225 446 aa20.97■□□□□ 0.95
ACTN1-220ENST00000556433 SSR2P43308 183 aa20.97■□□□□ 0.95
ACTN1-220ENST00000556433 KIR3DL1P43629 444 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms