RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.72□□□□□ -1.01
ACTN1-218ENST00000556343 ROPN1LQ96C74 230 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 COQ8BQ96D53 544 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 ZBED6CLQ96FA7 236 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-218ENST00000556343 ZNF764Q96H86 408 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-218ENST00000556343 EGLN2Q96KS0 407 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 C10orf90Q96M02 699 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 BBS4Q96RK4 519 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 MAPKAP1Q9BPZ7 522 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 B3GNT4Q9C0J1 378 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 AICDAQ9GZX7 198 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 RPF2Q9H7B2 306 aaKnown RBP8.72□□□□□ -1.01
ACTN1-218ENST00000556343 LHX9Q9NQ69 397 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 ARL8BQ9NVJ2 186 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 OCIAD1Q9NX40 245 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 TAS2R7Q9NYW3 318 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 GPN3Q9UHW5 284 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-218ENST00000556343 ENTPD4Q9Y227 616 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 MYO15AQ9UKN7 3530 aa8.72□□□□□ -1.01
ACTN1-218ENST00000556343 FRYLO94915 3013 aa8.71□□□□□ -1.01
ACTN1-218ENST00000556343 RIF1Q5UIP0 2472 aaKnown RBP8.71□□□□□ -1.01
ACTN1-218ENST00000556343 PRSS51A0A1B0GVH4 220 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 SPAARA0A1B0GVQ0 90 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 B2RBV5 119 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 MRASO14807 208 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 AIM2O14862 343 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 PDPK1O15530 556 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 FOXS1O43638 330 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 RDH16O75452 317 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 DKK1O94907 266 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 UNC5CO95185 931 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 KCNH1O95259 989 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 BMP10O95393 424 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 CBX6O95503 412 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 ANP32DO95626 131 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 CCNYL3P0C7X3 344 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 PTPN4P29074 926 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 MPIP34949 423 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 TRPC1P48995 793 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 MAPK10P53779 464 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 OCA2Q04671 838 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 NFYCQ13952 458 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 DSG2Q14126 1118 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 DNAL1Q4LDG9 190 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 LACTB2Q53H82 288 aaPredicted RBP8.71□□□□□ -1.02
ACTN1-218ENST00000556343 SPANXN4Q5MJ08 99 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 PWWP2BQ6NUJ5 590 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 SLCO6A1Q86UG4 719 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 FUNDC1Q8IVP5 155 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 ARHGAP24Q8N264 748 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 ARHGEF39Q8N4T4 335 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 POU5F2Q8N7G0 328 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 OR7A2PQ8NGA2 310 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 OR4K14Q8NGD5 310 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 OR9I1Q8NGQ6 314 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 TBC1D20Q96BZ9 403 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 OR1F2PQ96R84 312 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 PHOX2BQ99453 314 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 SH3GL1Q99961 368 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 HOPXQ9BPY8 73 aaPredicted RBP8.71□□□□□ -1.02
ACTN1-218ENST00000556343 PELOQ9BRX2 385 aaKnown RBP8.71□□□□□ -1.02
ACTN1-218ENST00000556343 DDA1Q9BW61 102 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 C1orf21Q9H246 121 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 SYNPO2LQ9H987 977 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 MKKSQ9NPJ1 570 aaPredicted RBP8.71□□□□□ -1.02
ACTN1-218ENST00000556343 SLC35C2Q9NQQ7 365 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 TOR4AQ9NXH8 423 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 KCMF1Q9P0J7 381 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 PISDQ9UG56 409 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 BTNL2Q9UIR0 455 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 UTS2RQ9UKP6 389 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 AP3M1Q9Y2T2 418 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 MRPS2Q9Y399 296 aaKnown RBP8.71□□□□□ -1.02
ACTN1-218ENST00000556343 MAP4K5Q9Y4K4 846 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 ATG4BQ9Y4P1 393 aa8.71□□□□□ -1.02
ACTN1-218ENST00000556343 PTPRZ1P23471 2315 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-218ENST00000556343 C15orf38-AP3S2A0A0A6YYH1 394 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 A0A1W2PR48 441 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 A0A1W2PRB8 838 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 ERICH4A6NGS2 130 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 ZNF860A6NHJ4 632 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 C9J4A7 227 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 H3BMH7 237 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 AGRPO00253 132 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 RNASET2O00584 256 aaKnown RBP8.7□□□□□ -1.02
ACTN1-218ENST00000556343 TM4SF5O14894 197 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 CASC3O15234 703 aaKnown RBP8.7□□□□□ -1.02
ACTN1-218ENST00000556343 NVLO15381 856 aaKnown RBP8.7□□□□□ -1.02
ACTN1-218ENST00000556343 GYG2O15488 501 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 CTNSO60931 367 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 ERN1O75460 977 aaKnown RBP8.7□□□□□ -1.02
ACTN1-218ENST00000556343 ERAL1O75616 437 aaKnown RBP8.7□□□□□ -1.02
ACTN1-218ENST00000556343 SLITRK5O94991 958 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 KCNK5O95279 499 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 AIFM1O95831 613 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 B3GALT4O96024 378 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 ALBP02768 609 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 CTSBP07858 339 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 FHP07954 510 aa8.7□□□□□ -1.02
ACTN1-218ENST00000556343 CCL4P13236 92 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms