RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 RASL10BQ96S79 203 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 MAPKAP1Q9BPZ7 522 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 SPOCK3Q9BQ16 436 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 ALOXE3Q9BYJ1 711 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 UCK2Q9BZX2 261 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 EHD1Q9H4M9 534 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 SAYSD1Q9NPB0 183 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 TIMMDC1Q9NPL8 285 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 PLSCR2Q9NRY7 297 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 CD274Q9NZQ7 290 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 MYOTQ9UBF9 498 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 PTBP2Q9UKA9 531 aaKnown RBP12.33□□□□□ -0.44
TGFB3-204ENST00000556285 SAR1BQ9Y6B6 198 aa12.33□□□□□ -0.44
TGFB3-204ENST00000556285 ARHGAP21Q5T5U3 1957 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 NF1P21359 2839 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 A8MVJ9 347 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 CCDC188H7C350 402 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 CCNT2O60583 730 aaKnown RBP12.32□□□□□ -0.44
TGFB3-204ENST00000556285 STK16O75716 305 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 ETHE1O95571 254 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 TUBB4AP04350 444 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 GSTM2P28161 218 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 GPX6P59796 221 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 PPIAP62937 165 aaKnown RBP12.32□□□□□ -0.44
TGFB3-204ENST00000556285 TLE4Q04727 773 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 DLG1Q12959 904 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 CHIT1Q13231 466 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 PDK4Q16654 411 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 SULT1C3Q6IMI6 304 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 CCDC71Q8IV32 467 aaPredicted RBP12.32□□□□□ -0.44
TGFB3-204ENST00000556285 RNF175Q8N4F7 328 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 DOK4Q8TEW6 326 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 ANKRD9Q96BM1 317 aaPredicted RBP12.32□□□□□ -0.44
TGFB3-204ENST00000556285 UBXN10Q96LJ8 280 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 GPR22Q99680 433 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 RBBP8Q99708 897 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 NAPGQ99747 312 aaPredicted RBP12.32□□□□□ -0.44
TGFB3-204ENST00000556285 TREX2Q9BQ50 279 aaPredicted RBP12.32□□□□□ -0.44
TGFB3-204ENST00000556285 SORBS1Q9BX66 1292 aaKnown RBP12.32□□□□□ -0.44
TGFB3-204ENST00000556285 CAPS2Q9BXY5 557 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 OR8D2Q9GZM6 311 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 PITHD1Q9GZP4 211 aaPredicted RBP12.32□□□□□ -0.44
TGFB3-204ENST00000556285 COPS7BQ9H9Q2 264 aaPredicted RBP12.32□□□□□ -0.44
TGFB3-204ENST00000556285 GRPEL1Q9HAV7 217 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 NPDC1Q9NQX5 325 aaPredicted RBP12.32□□□□□ -0.44
TGFB3-204ENST00000556285 HPF1Q9NWY4 346 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 NSMCE4AQ9NXX6 385 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 TNFRSF10DQ9UBN6 386 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 VTI1BQ9UEU0 232 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 RNF6Q9Y252 685 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 MRPS33Q9Y291 106 aaKnown RBP12.32□□□□□ -0.44
TGFB3-204ENST00000556285 LIPGQ9Y5X9 500 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 CLCA3PQ9Y6N3 262 aa12.32□□□□□ -0.44
TGFB3-204ENST00000556285 VPS13CQ709C8 3753 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 A0A088AWK7 358 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 TCRBV9S1A1TA0A576 114 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 FAM159BA6NKW6 160 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 FAM90A27PA6NNH2 459 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 C17orf105B2RV13 164 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 NPIPA2E9PIF3 369 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 NPIPA3F8WFD2 350 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 SAP18O00422 153 aaKnown RBP12.31□□□□□ -0.44
TGFB3-204ENST00000556285 TGFB1P01137 390 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 CELA3AP09093 270 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 ZNF10P21506 573 aaPredicted RBP12.31□□□□□ -0.44
TGFB3-204ENST00000556285 ATP5A1P25705 553 aaKnown RBP12.31□□□□□ -0.44
TGFB3-204ENST00000556285 MSH2P43246 934 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 RNF4P78317 190 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 PLGLB1Q02325 96 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 ZKSCAN8Q15776 578 aaPredicted RBP12.31□□□□□ -0.44
TGFB3-204ENST00000556285 HSDL2Q6YN16 418 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 DGAT2L6Q6ZPD8 337 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 CMC1Q7Z7K0 106 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 OR4N5Q8IXE1 308 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 TCAIMQ8N3R3 496 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 TMEM132CQ8N3T6 1108 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 ACOT4Q8N9L9 421 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 PDPRQ8NCN5 879 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 OR5M9Q8NGP3 310 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 SLC2A12Q8TD20 617 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 ZNF473Q8WTR7 871 aaKnown RBP12.31□□□□□ -0.44
TGFB3-204ENST00000556285 KIAA1191Q96A73 305 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 C14orf79Q96F83 325 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 TSPAN17Q96FV3 270 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 SEC16BQ96JE7 1060 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 SCYL1Q96KG9 808 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 EFCAB11Q9BUY7 163 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 MS4A8Q9BY19 250 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 TTTY12Q9BZ98 90 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 CD244Q9BZW8 370 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 CNOT10Q9H9A5 744 aaKnown RBP12.31□□□□□ -0.44
TGFB3-204ENST00000556285 PNPLA3Q9NST1 481 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 GRHL1Q9NZI5 618 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 COQ3Q9NZJ6 369 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 PYCARDQ9ULZ3 195 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 SETD2Q9BYW2 2564 aaPredicted RBP12.31□□□□□ -0.44
TGFB3-204ENST00000556285 FREM3P0C091 2139 aa12.31□□□□□ -0.44
TGFB3-204ENST00000556285 HRKO00198 91 aa12.3□□□□□ -0.44
TGFB3-204ENST00000556285 TOXO94900 526 aa12.3□□□□□ -0.44
TGFB3-204ENST00000556285 GLSO94925 669 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms