RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 C1orf229Q6ZS94 237 aaPredicted RBP6.52□□□□□ -1.37
SLIRP-204ENST00000555890 DHDDSQ86SQ9 333 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 TMPRSS11BQ86T26 416 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 C11orf74Q86VG3 221 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 C17orf64Q86WR6 236 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 NAXDQ8IW45 347 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 KRT78Q8N1N4 520 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 DPP10Q8N608 796 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 RNF148Q8N7C7 305 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 GALNT6Q8NCL4 622 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 HIPK4Q8NE63 616 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 OR5AR1Q8NGP9 310 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 OR5K2Q8NHB8 316 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 WDR20Q8TBZ3 569 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 SLC5A11Q8WWX8 675 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 JPH3Q8WXH2 748 aaPredicted RBP6.52□□□□□ -1.37
SLIRP-204ENST00000555890 SMPDL3AQ92484 453 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 STARD8Q92502 1023 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 NEIL2Q969S2 332 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 VPS33AQ96AX1 596 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 SH3KBP1Q96B97 665 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 RSRC1Q96IZ7 334 aaKnown RBP6.52□□□□□ -1.37
SLIRP-204ENST00000555890 LRGUKQ96M69 825 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 WDR92Q96MX6 357 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 OR4K3Q96R72 315 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 SH3GL1Q99961 368 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 ZFYVE21Q9BQ24 234 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 GPATCH1Q9BRR8 931 aaKnown RBP6.52□□□□□ -1.37
SLIRP-204ENST00000555890 RAB11FIP5Q9BXF6 653 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 MUC13Q9H3R2 512 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 OSGEPL1Q9H4B0 414 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 RMND5AQ9H871 391 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 SLC52A3Q9NQ40 469 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 VPS29Q9UBQ0 182 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 CIDEBQ9UHD4 219 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 ADGRE2Q9UHX3 823 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 PACSIN3Q9UKS6 424 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 PSMD13Q9UNM6 376 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 RUVBL1Q9Y265 456 aaKnown RBP6.52□□□□□ -1.37
SLIRP-204ENST00000555890 HEBP2Q9Y5Z4 205 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 MEGF8Q7Z7M0 2845 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 CROCCQ5TZA2 2017 aa6.52□□□□□ -1.37
SLIRP-204ENST00000555890 MN1Q10571 1320 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 KRT87PA6NCN2 255 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 C9JVG2 144 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 FOXE1O00358 373 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 ACOT8O14734 319 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 ANKRD28O15084 1053 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 NVLO15381 856 aaKnown RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 HNRNPRO43390 633 aaKnown RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 PRAMEF4O60810 478 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 GMNNO75496 209 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 SORBS2O94875 1100 aaKnown RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 TIAF1O95411 115 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 SEMA4FO95754 770 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 DDAH2O95865 285 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 HSD17B1P14061 328 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 AMD1P17707 334 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 GABRG2P18507 467 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 TCN1P20061 433 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 CD22P20273 847 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 HNRNPA2B1P22626 353 aaKnown RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 SLC6A2P23975 617 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 NDUFS1P28331 727 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 IL12AP29459 219 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 OXTRP30559 389 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 SERPINB1P30740 379 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 S100A3P33764 101 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 NUDT1P36639 197 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 DPP6P42658 865 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 ASMTP46597 345 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 ZFP36L2P47974 494 aaKnown RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 PTDSS1P48651 473 aaKnown RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 TPMTP51580 245 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 CCR5P51681 352 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 PPP2CBP62714 309 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 PPP2CAP67775 309 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 MS4A2Q01362 244 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 DDX39BQ13838 428 aaKnown RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 PTGR1Q14914 329 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 NFATC4Q14934 902 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 RTP5Q14D33 572 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 KIAA0040Q15053 153 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 MAPKAPK3Q16644 382 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 DPY19L1Q2PZI1 675 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 MUM1Q2TAK8 710 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 SPIN4Q56A73 249 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 PRAMEF9Q5VWM5 478 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 NOXRED1Q6NXP6 359 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 SLC2A7Q6PXP3 512 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 ENPP7Q6UWV6 458 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 MSANTD1Q6ZTZ1 278 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 SPATA24Q86W54 205 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 DHFR2Q86XF0 187 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 SLC15A3Q8IY34 581 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 LAS2Q8IYD9 372 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 LRRC56Q8IYG6 542 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 BHLHE22Q8NFJ8 381 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 OR7G3Q8NG95 312 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 HMGB4Q8WW32 186 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms