RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CD82P27701 267 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 XCR1P46094 333 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 GABREP78334 506 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 OLR1P78380 273 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 SLC13A2Q13183 592 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 KRT72Q14CN4 511 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 FAM174BQ3ZCQ3 159 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 TIGD2Q4W5G0 525 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 C1orf189Q5VU69 101 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 FAM91A1Q658Y4 838 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 ZNF793Q6ZN11 406 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 UBE3DQ7Z6J8 389 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 ZNF595Q8IYB9 648 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 TRIML2Q8N7C3 387 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 FAM47BQ8NA70 645 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 DNAJB8Q8NHS0 232 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 RP9Q8TA86 221 aaKnown RBP10.59□□□□□ -0.71
SHMT2-220ENST00000555634 TANKQ92844 425 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 GFM2Q969S9 779 aaKnown RBP10.59□□□□□ -0.71
SHMT2-220ENST00000555634 FKBP10Q96AY3 582 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 TBC1D20Q96BZ9 403 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 NXPE2Q96DL1 559 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 SPDL1Q96EA4 605 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 C11orf24Q96F05 449 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-220ENST00000555634 ZBED6CLQ96FA7 236 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-220ENST00000555634 LRFN5Q96NI6 719 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 BBS4Q96RK4 519 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 PELOQ9BRX2 385 aaKnown RBP10.59□□□□□ -0.71
SHMT2-220ENST00000555634 ZNF717Q9BY31 904 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-220ENST00000555634 B3GNT4Q9C0J1 378 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 BHLHE41Q9C0J9 482 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-220ENST00000555634 MYLK2Q9H1R3 596 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 CLMPQ9H6B4 373 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 NEUROD4Q9HD90 331 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 BAIAP2L1Q9UHR4 511 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 TAGLN3Q9UI15 199 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 LEF1Q9UJU2 399 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-220ENST00000555634 UTS2RQ9UKP6 389 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 PCDHGA8Q9Y5G5 932 aa10.59□□□□□ -0.71
SHMT2-220ENST00000555634 FER1L5A0AVI2 2057 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 TM4SF5O14894 197 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 CHST10O43529 356 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 HYAL3O43820 417 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-220ENST00000555634 TBX6O95947 436 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-220ENST00000555634 PGRP06401 933 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 FURINP09958 794 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 ATXN8OSP0DMR3 200 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 SMIM10L1P0DMW3 83 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 CCL4P13236 92 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 ITIH1P19827 911 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 GPX3P22352 226 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 HNRNPH2P55795 449 aaKnown RBP10.58□□□□□ -0.72
SHMT2-220ENST00000555634 UFM1P61960 85 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 PLIN5Q00G26 463 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 STX4Q12846 297 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 TARDBPQ13148 414 aaKnown RBP eCLIP10.58□□□□□ -0.72
SHMT2-220ENST00000555634 BIKQ13323 160 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 ART3Q13508 389 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 MAPKAPK3Q16644 382 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 MINDY4Q4G0A6 757 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 NKAIN1Q4KMZ8 207 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 COQ5Q5HYK3 327 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 C6orf10Q5SRN2 563 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 FAM71E1Q6IPT2 247 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 PAOXQ6QHF9 649 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 PRSS41Q7RTY9 318 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 DGLUCYQ7Z3D6 616 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 SNX32Q86XE0 403 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 PDSS2Q86YH6 399 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 CA13Q8N1Q1 262 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 ESX1Q8N693 406 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 OR51Q1Q8NH59 317 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 MR1Q95460 341 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 EXOSC8Q96B26 276 aaKnown RBP10.58□□□□□ -0.72
SHMT2-220ENST00000555634 PEX11GQ96HA9 241 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 SMIM10Q96HG1 83 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 ITCHQ96J02 903 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 VPS50Q96JG6 964 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 OR52E6Q96RD3 313 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 DUSP26Q9BV47 211 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 ZNF385DQ9H6B1 395 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 SYNPO2LQ9H987 977 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 POLR1BQ9H9Y6 1135 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 LHX9Q9NQ69 397 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 THSD1Q9NS62 852 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 SEMA3GQ9NS98 782 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 GID8Q9NWU2 228 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 TEX10Q9NXF1 929 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-220ENST00000555634 NDUFAF1Q9Y375 327 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 MRPS2Q9Y399 296 aaKnown RBP10.58□□□□□ -0.72
SHMT2-220ENST00000555634 MMACHCQ9Y4U1 282 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 PCDHGA3Q9Y5H0 932 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 PCDHA9Q9Y5H5 950 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 MAU2Q9Y6X3 613 aa10.58□□□□□ -0.72
SHMT2-220ENST00000555634 CFAP54Q96N23 3096 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 SPTBP11277 2137 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 C15orf38-AP3S2A0A0A6YYH1 394 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 C4orf51C9J302 202 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 H3BMH7 237 aa10.57□□□□□ -0.72
SHMT2-220ENST00000555634 STMND1H3BQB6 276 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms