RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CASP9P55211 416 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 YBEYP58557 167 aaPredicted RBP4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 HSPA14Q0VDF9 509 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 WASHC5Q12768 1159 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 ZNF177Q13360 481 aaPredicted RBP4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 FASTKD3Q14CZ7 662 aaKnown RBP4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 HEPACAMQ14CZ8 416 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 MOGAT2Q3SYC2 334 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 CAPN13Q6MZZ7 669 aaPredicted RBP4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 BATF2Q8N1L9 274 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 METTL4Q8N3J2 472 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 EXOC6Q8TAG9 804 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 GPR148Q8TDV2 347 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 CNRIP1Q96F85 164 aaPredicted RBP4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 PINK1Q9BXM7 581 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 FGFBP2Q9BYJ0 223 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 KRTAP9-8Q9BYQ0 159 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 DDX47Q9H0S4 455 aaKnown RBP4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 VPS33BQ9H267 617 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 KCNK13Q9HB14 408 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 PIGVQ9NUD9 493 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 FETUBQ9UGM5 382 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 BAIAP2L1Q9UHR4 511 aa4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 MRPS2Q9Y399 296 aaKnown RBP4.58□□□□□ -1.68
CKS1BP1-201ENST00000555221 CHEK1O14757 476 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 ZSCAN5DPP0CG00 497 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 AOC1P19801 751 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 AHCYP23526 432 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 RPL9P32969 192 aaKnown RBP4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 FHITP49789 147 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 CNN1P51911 297 aaKnown RBP4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 NDST2P52849 883 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 CRYBA2P53672 197 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 SLC12A3P55017 1021 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 GEMP55040 296 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 STARD6P59095 220 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 CCZ1BP86790 482 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 CCZ1P86791 482 aaPredicted RBP4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 HYAL1Q12794 435 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 OR1C1Q15619 314 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 C1orf189Q5VU69 101 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 CNSTQ6PJW8 725 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 DLEU7Q6UYE1 221 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 BHLHA9Q7RTU4 235 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 LRRTM1Q86UE6 522 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 NEK11Q8NG66 645 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 OR6M1Q8NGM8 313 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 OR6F1Q8NGZ6 308 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 GOLGA5Q8TBA6 731 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 ATP8B4Q8TF62 1192 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 SLC13A3Q8WWT9 602 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 LGMNQ99538 433 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 AGPAT1Q99943 283 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 TRIM51Q9BSJ1 452 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 MCRIP2Q9BUT9 160 aaKnown RBP4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 ABCG4Q9H172 646 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 UPF3AQ9H1J1 476 aaKnown RBP4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 CARD9Q9H257 536 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 MDFICQ9P1T7 246 aa4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 ERRFI1Q9UJM3 462 aaPredicted RBP4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 MRTO4Q9UKD2 239 aaKnown RBP4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 MRPS18CQ9Y3D5 142 aaKnown RBP4.57□□□□□ -1.68
CKS1BP1-201ENST00000555221 MACROD2A1Z1Q3 448 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 ANHXE9PGG2 379 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 EEF2KO00418 725 aaKnown RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 TRAFD1O14545 582 aaPredicted RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 SEC22BO75396 215 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 NXPH4O95158 308 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 DUS4LO95620 317 aaKnown RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 CXCL14O95715 111 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 TPBGLP0DKB5 382 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 IL10P22301 178 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 GLRA1P23415 457 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 FCARP24071 287 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 MARCKSP29966 332 aaPredicted RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 FCGR2BP31994 310 aaPredicted RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 FCGR2CP31995 323 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 HNRNPFP52597 415 aaKnown RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 MSLNQ13421 630 aaPredicted RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 KIAA0141Q14154 515 aaPredicted RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 MPPE1Q53F39 396 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 FASTKD1Q53R41 847 aaKnown RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 ZFAND4Q86XD8 727 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 ZNF619Q8N2I2 560 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 LEMD2Q8NC56 503 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 KIAA1524Q8TCG1 905 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 LIPHQ8WWY8 451 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 ATXN7L3BQ96GX2 97 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 POM121L2Q96KW2 1035 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 SPATA13Q96N96 652 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 AGAP4Q96P64 663 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 TMEM237Q96Q45 408 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 SPAG8Q99932 426 aaPredicted RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 PKP2Q99959 881 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 WWP1Q9H0M0 922 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 NMUR1Q9HB89 426 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 SYTL2Q9HCH5 934 aa4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 DDX28Q9NUL7 540 aaKnown RBP4.56□□□□□ -1.68
CKS1BP1-201ENST00000555221 NARFQ9UHQ1 456 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms