RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 LIM2P55344 173 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 SOX8P57073 446 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 MAGOHP61326 146 aaKnown RBP9.98□□□□□ -0.81
TMEM260-206ENST00000555046 TRA2BP62995 288 aaKnown RBP9.98□□□□□ -0.81
TMEM260-206ENST00000555046 RUNX2Q13950 521 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 SERTAD2Q14140 314 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 PCLAFQ15004 111 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 SYT16Q17RD7 645 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 KRTAP21-3Q3LHN1 58 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 TMEM205Q6UW68 189 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 KIRREL2Q6UWL6 708 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 QSOX2Q6ZRP7 698 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 RIPOR1Q6ZS17 1223 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 SHISA6Q6ZSJ9 500 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 RPS27LQ71UM5 84 aaKnown RBP9.98□□□□□ -0.81
TMEM260-206ENST00000555046 UBE3DQ7Z6J8 389 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 GPR180Q86V85 440 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 NUDT13Q86X67 352 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 HPS6Q86YV9 775 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 CLYBLQ8N0X4 340 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 CA13Q8N1Q1 262 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 DTWD1Q8N5C7 304 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 AGAP11Q8TF27 550 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 EXTL1Q92935 676 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 METTL2AQ96IZ6 378 aaKnown RBP9.98□□□□□ -0.81
TMEM260-206ENST00000555046 TUBB6Q9BUF5 446 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 VN1R1Q9GZP7 353 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 C12orf65Q9H3J6 166 aaKnown RBP9.98□□□□□ -0.81
TMEM260-206ENST00000555046 RIC8BQ9NVN3 520 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 PSME2Q9UL46 239 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 WBP11Q9Y2W2 641 aaKnown RBP9.98□□□□□ -0.81
TMEM260-206ENST00000555046 HS3ST3B1Q9Y662 390 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 SPG11Q96JI7 2443 aa9.98□□□□□ -0.81
TMEM260-206ENST00000555046 A0A1W2PQ72 361 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 ARGFXA6NJG6 315 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 TMEM114B3SHH9 223 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 SLC28A1O00337 649 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 SAP18O00422 153 aaKnown RBP9.97□□□□□ -0.81
TMEM260-206ENST00000555046 SOCS6O14544 535 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 AZIN1O14977 448 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 SNPHO15079 494 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 DYRK3O43781 588 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 MYO1DO94832 1006 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 TBX6O95947 436 aaPredicted RBP9.97□□□□□ -0.81
TMEM260-206ENST00000555046 SERPINE1P05121 402 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 FURINP09958 794 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 FAM58BPP0C7Q3 252 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 CREB1P16220 341 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 CPN2P22792 545 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 CCL11P51671 97 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 POLE2P56282 527 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 OR4D2P58180 307 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 SLC13A2Q13183 592 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 ATP1A4Q13733 1029 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 ABRAXAS2Q15018 415 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 EXT1Q16394 746 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 IMPG1Q17R60 797 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 SPIN4Q56A73 249 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 ARL13AQ5H913 290 aaPredicted RBP9.97□□□□□ -0.81
TMEM260-206ENST00000555046 CCNYL2Q5T2Q4 361 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 ATP1A1-AS1Q5TC04 95 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 JMJD6Q6NYC1 403 aaPredicted RBP9.97□□□□□ -0.81
TMEM260-206ENST00000555046 TRIM46Q7Z4K8 759 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 CPEB2Q7Z5Q1 589 aaKnown RBP9.97□□□□□ -0.81
TMEM260-206ENST00000555046 PPP1R32Q7Z5V6 425 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 CUZD1Q86UP6 607 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 METTL4Q8N3J2 472 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 OR11G2Q8NGC1 345 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 OR5T3Q8NGG3 340 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 FAM76AQ8TAV0 307 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 TM9SF4Q92544 642 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 LPAR4Q99677 370 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 PAIP2Q9BPZ3 127 aaKnown RBP9.97□□□□□ -0.81
TMEM260-206ENST00000555046 FAIM2Q9BWQ8 316 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 ZNF700Q9H0M5 742 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 PRTFDC1Q9NRG1 225 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 KCMF1Q9P0J7 381 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 ZNF225Q9UK10 706 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 FBXL4Q9UKA2 621 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.97□□□□□ -0.81
TMEM260-206ENST00000555046 TRAF6Q9Y4K3 522 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 PCDHGA9Q9Y5G4 932 aaKnown RBP9.97□□□□□ -0.81
TMEM260-206ENST00000555046 HEATR5BQ9P2D3 2071 aa9.97□□□□□ -0.81
TMEM260-206ENST00000555046 A0A0G2JN53 185 aa9.96□□□□□ -0.82
TMEM260-206ENST00000555046 TMEM120BA0PK00 339 aa9.96□□□□□ -0.82
TMEM260-206ENST00000555046 HMGB1P1B2RPK0 211 aaPredicted RBP9.96□□□□□ -0.82
TMEM260-206ENST00000555046 CYR61O00622 381 aa9.96□□□□□ -0.82
TMEM260-206ENST00000555046 PLPP1O14494 284 aa9.96□□□□□ -0.82
TMEM260-206ENST00000555046 CDK2AP1O14519 115 aa9.96□□□□□ -0.82
TMEM260-206ENST00000555046 UBFD1O14562 309 aaKnown RBP9.96□□□□□ -0.82
TMEM260-206ENST00000555046 RGS14O43566 566 aa9.96□□□□□ -0.82
TMEM260-206ENST00000555046 SH3BGRLO75368 114 aa9.96□□□□□ -0.82
TMEM260-206ENST00000555046 CDC123O75794 336 aaPredicted RBP9.96□□□□□ -0.82
TMEM260-206ENST00000555046 KLK1P06870 262 aa9.96□□□□□ -0.82
TMEM260-206ENST00000555046 CERS1P27544 350 aa9.96□□□□□ -0.82
TMEM260-206ENST00000555046 BSGP35613 385 aa9.96□□□□□ -0.82
TMEM260-206ENST00000555046 MAPK12P53778 367 aa9.96□□□□□ -0.82
TMEM260-206ENST00000555046 OLR1P78380 273 aa9.96□□□□□ -0.82
TMEM260-206ENST00000555046 RHAGQ02094 409 aa9.96□□□□□ -0.82
TMEM260-206ENST00000555046 ACSM2AQ08AH3 577 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms