RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 JUNBP17275 347 aaPredicted RBP16.55■□□□□ 0.24
SHOX-204ENST00000554971 HOXB9P17482 250 aaPredicted RBP16.55■□□□□ 0.24
SHOX-204ENST00000554971 NDUFS1P28331 727 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 CD1CP29017 333 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 CSF2RBP32927 897 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 CCL7P80098 99 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 TUBA3CQ13748 450 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 ZC3H12BQ5HYM0 836 aaKnown RBP16.55■□□□□ 0.24
SHOX-204ENST00000554971 THAP5Q7Z6K1 395 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 SERPINA11Q86U17 422 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 STK32CQ86UX6 486 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 GPR180Q86V85 440 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 DCUN1D3Q8IWE4 304 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 ZCCHC7Q8N3Z6 543 aaKnown RBP16.55■□□□□ 0.24
SHOX-204ENST00000554971 KRTCAP2Q8N6L1 136 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 OR5K1Q8NHB7 308 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 DOK1Q99704 481 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 ICKQ9UPZ9 632 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 TDRKHQ9Y2W6 561 aaKnown RBP16.55■□□□□ 0.24
SHOX-204ENST00000554971 NTN3O00634 580 aaPredicted RBP16.55■□□□□ 0.24
SHOX-204ENST00000554971 AMD1P17707 334 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 CDH15P55291 814 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 ILKQ13418 452 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 TOP3AQ13472 1001 aaPredicted RBP16.55■□□□□ 0.24
SHOX-204ENST00000554971 IL18R1Q13478 541 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 TMEM214Q6NUQ4 689 aaKnown RBP16.55■□□□□ 0.24
SHOX-204ENST00000554971 ERICH5Q6P6B1 374 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 ZNF773Q6PK81 442 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 TBPL2Q6SJ96 375 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 MBOAT1Q6ZNC8 495 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 HIPK1Q86Z02 1210 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 ZNF555Q8NEP9 628 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 ZFPM2Q8WW38 1151 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 XKR8Q9H6D3 395 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 IFT80Q9P2H3 777 aaPredicted RBP16.55■□□□□ 0.24
SHOX-204ENST00000554971 EVPLLA8MZ36 301 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 CCNDBP1O95273 360 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 RPLP0P05388 317 aaKnown RBP16.54■□□□□ 0.24
SHOX-204ENST00000554971 TYRP1P17643 537 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 HNF4AP41235 474 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 PDX1P52945 283 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 PPP1CAP62136 330 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 KRT33BQ14525 404 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 AMZ1Q400G9 498 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 OTUD3Q5T2D3 398 aaPredicted RBP16.54■□□□□ 0.24
SHOX-204ENST00000554971 DHRS13Q6UX07 377 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 C8orf59Q8N0T1 100 aaPredicted RBP16.54■□□□□ 0.24
SHOX-204ENST00000554971 HDAC2Q92769 488 aaKnown RBP16.54■□□□□ 0.24
SHOX-204ENST00000554971 SH3KBP1Q96B97 665 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 CCDC138Q96M89 665 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.54■□□□□ 0.24
SHOX-204ENST00000554971 CXorf21Q9HAI6 301 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 EVA1BQ9NVM1 165 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 C3orf18Q9UK00 162 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 BLOC1S6Q9UL45 172 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 ATXN7L1Q9ULK2 861 aaPredicted RBP16.54■□□□□ 0.24
SHOX-204ENST00000554971 SAMD4AQ9UPU9 718 aaKnown RBP16.54■□□□□ 0.24
SHOX-204ENST00000554971 DLGAP4Q9Y2H0 992 aa16.54■□□□□ 0.24
SHOX-204ENST00000554971 GNGT2O14610 69 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 SEC24DO94855 1032 aaPredicted RBP16.53■□□□□ 0.24
SHOX-204ENST00000554971 UBXN7O94888 489 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 CPNE6O95741 557 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 SDC1P18827 310 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 DCKP27707 260 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 MAP4P27816 1152 aaKnown RBP16.53■□□□□ 0.24
SHOX-204ENST00000554971 PTPN6P29350 595 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 KIR3DL1P43629 444 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 EPHA4P54764 986 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 PHC1P78364 1004 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 PPP2R2BQ00005 443 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 INSM1Q01101 510 aaPredicted RBP16.53■□□□□ 0.24
SHOX-204ENST00000554971 LRRC74AQ0VAA2 488 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 PUM1Q14671 1186 aaKnown RBP eCLIP16.53■□□□□ 0.24
SHOX-204ENST00000554971 PLCL1Q15111 1095 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 C10orf62Q5T681 223 aaPredicted RBP16.53■□□□□ 0.24
SHOX-204ENST00000554971 ZNF574Q6ZN55 896 aaPredicted RBP16.53■□□□□ 0.24
SHOX-204ENST00000554971 USP53Q70EK8 1073 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 LINC01555Q8NAE3 123 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 OR4E2Q8NGC2 313 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 FBXO30Q8TB52 745 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 ISOC1Q96CN7 298 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 NRBF2Q96F24 287 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 PYURFQ96I23 114 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 FOPNLQ96NB1 174 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 IL17FQ96PD4 163 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 NUDT22Q9BRQ3 303 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 SPATA9Q9BWV2 254 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 TWSG1Q9GZX9 223 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 LRRN3Q9H3W5 708 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 IKZF5Q9H5V7 419 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 BRF2Q9HAW0 419 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 GMEB1Q9Y692 573 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 V9GYQ6 96 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 AHCTF1Q8WYP5 2266 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 ANKRD33BA6NCL7 494 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 TRIM64BA6NI03 449 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 RFXANKO14593 260 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 DNAJB5O75953 348 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 PRKD3O94806 890 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 MT-ND1P03886 318 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms