RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CHERPQ8IWX8 916 aaKnown RBP9.92□□□□□ -0.82
SHMT2-215ENST00000554656 KIF2BQ8N4N8 673 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF808Q8N4W9 903 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-215ENST00000554656 CAMKVQ8NCB2 501 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 PLPP5Q8NEB5 264 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 ABHD11Q8NFV4 315 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 OR4K1Q8NGD4 311 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 OR56A3Q8NH54 315 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 SUN3Q8TAQ9 357 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 STAG3L4Q8TBR4 150 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 M1APQ8TC57 530 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 ANKRD49Q8WVL7 239 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 SLC13A3Q8WWT9 602 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 KIAA1191Q96A73 305 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 SEC16BQ96JE7 1060 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF354BQ96LW1 612 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 FRMD6Q96NE9 622 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 SARGQ9BW04 601 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 AICDAQ9GZX7 198 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 FAM107BQ9H098 131 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 PCBD2Q9H0N5 130 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 KCNK13Q9HB14 408 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 KLHL14Q9P2G3 628 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 C19orf25Q9UFG5 118 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-215ENST00000554656 TEKT2Q9UIF3 430 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF835Q9Y2P0 537 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 PCDHGB6Q9Y5F9 930 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 SLC22A7Q9Y694 548 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 CCDC168Q8NDH2 2452 aa9.92□□□□□ -0.82
SHMT2-215ENST00000554656 ASPDHA6ND91 283 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 GABRR3A8MPY1 467 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 SYCE1LA8MT33 242 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 MAGEB17A8MXT2 336 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 C19orf84I3L1E1 186 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 EBAG9O00559 213 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 SLC16A5O15375 505 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 NPHS1O60500 1241 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 GALR3O60755 368 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-215ENST00000554656 KERAO60938 352 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 SMIM24O75264 130 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 NEURL1O76050 574 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 SNRPB2P08579 225 aaKnown RBP9.91□□□□□ -0.82
SHMT2-215ENST00000554656 HTR1EP28566 365 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 SLC26A5P58743 744 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 GALNT1Q10472 559 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-215ENST00000554656 NSDHLQ15738 373 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 EXT1Q16394 746 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 ZSCAN26Q16670 478 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 MEP1AQ16819 746 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF630Q2M218 657 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-215ENST00000554656 RNFT1Q5M7Z0 435 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 CATSPEREQ5SY80 951 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 SPINK14Q6IE38 97 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 Q6ZPB1 254 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-215ENST00000554656 FAM47EQ6ZV65 393 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF771Q7L3S4 317 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-215ENST00000554656 ADAMTSL2Q86TH1 951 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 ISCA2Q86U28 154 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 MYO1HQ8N1T3 1032 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 ADAMTS18Q8TE60 1221 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 STON2Q8WXE9 905 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 FBXL8Q96CD0 374 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 GPR137Q96N19 417 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 OR1F2PQ96R84 312 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 ATOH8Q96SQ7 321 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 ELAC2Q9BQ52 826 aaKnown RBP9.91□□□□□ -0.82
SHMT2-215ENST00000554656 TRMOQ9BU70 441 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 MECRQ9BV79 373 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 TRIM8Q9BZR9 551 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 SLCO1B3Q9NPD5 702 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 SUCOQ9UBS9 1254 aaKnown RBP9.91□□□□□ -0.82
SHMT2-215ENST00000554656 HAO1Q9UJM8 370 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-215ENST00000554656 ARL2BPQ9Y2Y0 163 aa9.91□□□□□ -0.82
SHMT2-215ENST00000554656 AKAP9Q99996 3911 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 ANKRD17O75179 2603 aaKnown RBP9.9□□□□□ -0.82
SHMT2-215ENST00000554656 EML6Q6ZMW3 1958 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 TRBC2A0A5B9 178 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 FAM227AF5H4B4 570 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 NDUFS4O43181 175 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 CHST10O43529 356 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 OR1F1O43749 312 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 DLX3O60479 287 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 FHP07954 510 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 SLC35G6P0C7Q6 338 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF888P0CJ79 500 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-215ENST00000554656 CCND1P24385 295 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 GMPRP36959 345 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 SLC1A6P48664 564 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 CCR8P51685 355 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 OR4D2P58180 307 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 ABCE1P61221 599 aaKnown RBP9.9□□□□□ -0.82
SHMT2-215ENST00000554656 BTG2P78543 158 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 HSF1Q00613 529 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 HYAL2Q12891 473 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 RCN2Q14257 317 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 HERC3Q15034 1050 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.9□□□□□ -0.82
SHMT2-215ENST00000554656 DEFB134Q4QY38 66 aa9.9□□□□□ -0.82
SHMT2-215ENST00000554656 CDKL4Q5MAI5 379 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms