RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 SIX3O95343 332 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-211ENST00000554310 MAOAP21397 527 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 EEF1DP29692 281 aaKnown RBP12.25□□□□□ -0.45
SHMT2-211ENST00000554310 ARFIP1P53367 373 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 LIM2P55344 173 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 SLC26A5P58743 744 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 TAS2R50P59544 299 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 ZNF33BQ06732 778 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 ACTN3Q08043 901 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-211ENST00000554310 RUNX2Q13950 521 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 INAQ16352 499 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 KHDRBS2Q5VWX1 349 aaKnown RBP12.25□□□□□ -0.45
SHMT2-211ENST00000554310 H3F3CQ6NXT2 135 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 C6orf89Q6UWU4 347 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 RGS9BPQ6ZS82 235 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 CHSY3Q70JA7 882 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 YTHDF3Q7Z739 585 aaKnown RBP12.25□□□□□ -0.45
SHMT2-211ENST00000554310 PIGWQ7Z7B1 504 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 ZNF595Q8IYB9 648 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 LGI4Q8N135 537 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 SLC5A8Q8N695 610 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 HUS1BQ8NHY5 278 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 MGARPQ8TDB4 240 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 HAS2Q92819 552 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 SNRNP40Q96DI7 357 aaKnown RBP12.25□□□□□ -0.45
SHMT2-211ENST00000554310 ZNF354BQ96LW1 612 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 IPPKQ9H8X2 491 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 KCNK13Q9HB14 408 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 LYRM4Q9HD34 91 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 DMRT3Q9NQL9 472 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 PRDM7Q9NQW5 492 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 ABI3Q9P2A4 366 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 MAP10Q9P2G4 905 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 DAPP1Q9UN19 280 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 SPACA6W5XKT8 324 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 USP9YO00507 2555 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-211ENST00000554310 DOPEY2Q9Y3R5 2298 aa12.25□□□□□ -0.45
SHMT2-211ENST00000554310 RELNP78509 3460 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 BLACEA4D250 179 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 OR5H15A6NDH6 313 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 LRRC14BA6NHZ5 514 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 FAM227AF5H4B4 570 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 TM9SF1O15321 606 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 SPAG7O75391 227 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 ZIC2O95409 532 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-211ENST00000554310 CLDN9O95484 217 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 RPS17P08708 135 aaKnown RBP12.24□□□□□ -0.45
SHMT2-211ENST00000554310 HIST1H1TP22492 207 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-211ENST00000554310 SSR2P43308 183 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 TNFSF10P50591 281 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 RAP1GDS1P52306 607 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 WDR4P57081 412 aaKnown RBP12.24□□□□□ -0.45
SHMT2-211ENST00000554310 BTG2P78543 158 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 SLC18A2Q05940 514 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 SLC13A2Q13183 592 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 DDX39BQ13838 428 aaKnown RBP12.24□□□□□ -0.45
SHMT2-211ENST00000554310 AP5B1Q2VPB7 878 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 C10orf62Q5T681 223 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-211ENST00000554310 RPUSD3Q6P087 351 aaKnown RBP12.24□□□□□ -0.45
SHMT2-211ENST00000554310 ZNF793Q6ZN11 406 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 UBE3DQ7Z6J8 389 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 CISD2Q8N5K1 135 aaKnown RBP12.24□□□□□ -0.45
SHMT2-211ENST00000554310 ACOT4Q8N9L9 421 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 L3MBTL4Q8NA19 623 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 FAM47BQ8NA70 645 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 ACMSDQ8TDX5 336 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 ELP5Q8TE02 316 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 PHF21BQ96EK2 531 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 MAGEB10Q96LZ2 347 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-211ENST00000554310 BARD1Q99728 777 aaKnown RBP12.24□□□□□ -0.45
SHMT2-211ENST00000554310 NECTIN3Q9NQS3 549 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 PRTFDC1Q9NRG1 225 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 AGPAT4Q9NRZ5 378 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 ASF1BQ9NVP2 202 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 PCTPQ9UKL6 214 aa12.24□□□□□ -0.45
SHMT2-211ENST00000554310 RRP15Q9Y3B9 282 aaKnown RBP12.24□□□□□ -0.45
SHMT2-211ENST00000554310 POLEQ07864 2286 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 A8MT66 165 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 A8MUI8 341 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 CYR61O00622 381 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 WDPCPO95876 746 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 TGFB1P01137 390 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 VIMP08670 466 aaKnown RBP12.23□□□□□ -0.45
SHMT2-211ENST00000554310 KRT4P19013 534 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 ATP5A1P25705 553 aaKnown RBP12.23□□□□□ -0.45
SHMT2-211ENST00000554310 ARL1P40616 181 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-211ENST00000554310 UQCRFS1P47985 274 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 CCNG1P51959 295 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 TRAF3Q13114 568 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 CPSF6Q16630 551 aaKnown RBP eCLIP12.23□□□□□ -0.45
SHMT2-211ENST00000554310 MEP1AQ16819 746 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 GGTA1PQ4G0N0 100 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 ACER2Q5QJU3 275 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 DEPDC1Q5TB30 811 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 C4orf33Q8N1A6 199 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 BANPQ8N9N5 519 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 CCDC197Q8NCU1 140 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 OR1N1Q8NGS0 311 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 ATP6V1E2Q96A05 226 aa12.23□□□□□ -0.45
SHMT2-211ENST00000554310 RGMAQ96B86 450 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms