RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 IGKV3-11P04433 115 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 BMP7P18075 431 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 CCND1P24385 295 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 MGAT1P26572 445 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 RNF4P78317 190 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 RGS1Q08116 209 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 DHX9Q08211 1270 aaKnown RBP8.32□□□□□ -1.08
PRKCH-208ENST00000553846 MPEG1Q2M385 716 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 TTLL9Q3SXZ7 439 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 NHSL2Q5HYW2 709 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 HECTD2Q5U5R9 776 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 FNDC7Q5VTL7 733 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 FBXW10Q5XX13 1052 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 ADGRE4PQ86SQ3 457 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 SDCCAG8Q86SQ7 713 aaPredicted RBP8.32□□□□□ -1.08
PRKCH-208ENST00000553846 DENND6AQ8IWF6 608 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 NEIL2Q969S2 332 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 ISL2Q96A47 359 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 PERPQ96FX8 193 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 QRFPRQ96P65 431 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 CSF3RQ99062 836 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 GPR21Q99679 349 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 CCDC77Q9BR77 488 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 HAUS8Q9BT25 410 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 LACRTQ9GZZ8 138 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 LDAHQ9H6V9 325 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 SAMD15Q9P1V8 674 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 ADGRE2Q9UHX3 823 aa8.32□□□□□ -1.08
PRKCH-208ENST00000553846 CNOT11Q9UKZ1 510 aaKnown RBP8.32□□□□□ -1.08
PRKCH-208ENST00000553846 GOLGA6L9A6NEM1 432 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 EEF1E1-BLOC1S5C9J1V9 151 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 E5RI56 91 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 PSMD12O00232 456 aaPredicted RBP8.31□□□□□ -1.08
PRKCH-208ENST00000553846 CTIFO43310 598 aaKnown RBP8.31□□□□□ -1.08
PRKCH-208ENST00000553846 EEF1E1O43324 174 aaKnown RBP8.31□□□□□ -1.08
PRKCH-208ENST00000553846 TRIM3O75382 744 aaPredicted RBP8.31□□□□□ -1.08
PRKCH-208ENST00000553846 SERPINA6P08185 405 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 ZSCAN5DPP0CG00 497 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 CTSSP25774 331 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 HNRNPH1P31943 449 aaKnown RBP8.31□□□□□ -1.08
PRKCH-208ENST00000553846 CCKARP32238 428 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 RPL22P35268 128 aaKnown RBP8.31□□□□□ -1.08
PRKCH-208ENST00000553846 GRK3P35626 688 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 SLCO1A2P46721 670 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 PTH2RP49190 550 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 PCYT1AP49585 367 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 AGFG1P52594 562 aaKnown RBP8.31□□□□□ -1.08
PRKCH-208ENST00000553846 RAB38P57729 211 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 FOXF2Q12947 444 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 DUSP8Q13202 625 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 SP140Q13342 867 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 PIGGQ5H8A4 983 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 ZNF470Q6ECI4 717 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 VASNQ6EMK4 673 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 HEPHL1Q6MZM0 1159 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 UGT3A1Q6NUS8 523 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 NEPROQ6NW34 567 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 CAVIN1Q6NZI2 390 aaKnown RBP8.31□□□□□ -1.08
PRKCH-208ENST00000553846 OPN5Q6U736 354 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 C9orf40Q8IXQ3 194 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 TC2NQ8N9U0 490 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 C9orf106Q8NAJ2 232 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 MORN4Q8NDC4 146 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 ZNF721Q8TF20 911 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 SREK1Q8WXA9 508 aaKnown RBP8.31□□□□□ -1.08
PRKCH-208ENST00000553846 PYCR2Q96C36 320 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 HSPBAP1Q96EW2 488 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 SNF8Q96H20 258 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 GBP4Q96PP9 640 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 HS3ST6Q96QI5 342 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 PIGQQ9BRB3 760 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 RHBGQ9H310 441 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 EPB41L4BQ9H329 900 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 PARVBQ9HBI1 364 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 ZNF701Q9NV72 531 aaPredicted RBP8.31□□□□□ -1.08
PRKCH-208ENST00000553846 VTI1BQ9UEU0 232 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 IKBKGQ9Y6K9 419 aa8.31□□□□□ -1.08
PRKCH-208ENST00000553846 ZCWPW2A0A1B0GU75 182 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 TCRBV7S3A2A0A539 114 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 E7EVH7 732 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 WIPF1O43516 503 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 AVILO75366 819 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 ETHE1O95571 254 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 IFNB1P01574 187 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 IL2RAP01589 272 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 C1QAP02745 245 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 P04436 131 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 C8GP07360 202 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 NID1P14543 1247 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 HNF4AP41235 474 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 SLC1A2P43004 574 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 TRPC1P48995 793 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 NPY2RP49146 381 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 TPM4P67936 248 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 CCZ1BP86790 482 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 CCZ1P86791 482 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-208ENST00000553846 SIX1Q15475 284 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-208ENST00000553846 ACKR1Q16570 336 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 ADPRMQ3LIE5 342 aa8.3□□□□□ -1.08
PRKCH-208ENST00000553846 PRAMEF20Q5VT98 475 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms