RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ADPGKQ9BRR6 497 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 OR10A4Q9H209 315 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 PNNQ9H307 717 aaKnown RBP2.98□□□□□ -1.93
SCFD1-210ENST00000553693 FN3KQ9H479 309 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 ZCCHC17Q9NP64 241 aaKnown RBP2.98□□□□□ -1.93
SCFD1-210ENST00000553693 ABCD2Q9UBJ2 740 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 ZNF256Q9Y2P7 627 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-210ENST00000553693 CCDC144AA2RUR9 1427 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 TNS3Q68CZ2 1445 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 VPS8Q8N3P4 1428 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 CDC42BPGQ6DT37 1551 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 NRKQ7Z2Y5 1582 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 NUP188Q5SRE5 1749 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 NRAPQ86VF7 1730 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 UTRNP46939 3433 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 SBNO1A3KN83 1393 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 RREB1Q92766 1687 aa2.98□□□□□ -1.93
SCFD1-210ENST00000553693 NEDD4P46934 1319 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 ADGRB2O60241 1585 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 IGKV6D-21A0A0A0MT36 114 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 TRGV8A0A0C4DH27 118 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 IGHV3-16A0A0C4DH30 117 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 A0A1B0GTH9 108 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 TCP10L2B9ZVM9 353 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 RTL8CO15255 209 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 ZNF749O43361 778 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 PRDM1O75626 825 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 RENP00797 406 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 OR52Z1P0C646 297 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 SCG2P13521 617 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 FDPSP14324 419 aaKnown RBP2.97□□□□□ -1.93
SCFD1-210ENST00000553693 ANPEPP15144 967 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 FCGR2BP31994 310 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-210ENST00000553693 FCGR2CP31995 323 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 ELK3P41970 407 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 CRYBA2P53672 197 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 MTCP1P56278 107 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 PPIAP62937 165 aaKnown RBP2.97□□□□□ -1.93
SCFD1-210ENST00000553693 ROR1Q01973 937 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 Q1RN00 199 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 HECTD3Q5T447 861 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 CST9LP1Q5W188 147 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 FAM47EQ6ZV65 393 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 CHST3Q7LGC8 479 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 SLFN11Q7Z7L1 901 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 SERINC5Q86VE9 423 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 IQCA1Q86XH1 822 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 CCAR2Q8N163 923 aaKnown RBP2.97□□□□□ -1.93
SCFD1-210ENST00000553693 TMCO5AQ8N6Q1 288 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 OR4Q3Q8NH05 313 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 VPS33AQ96AX1 596 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 PAPOLGQ9BWT3 736 aaKnown RBP2.97□□□□□ -1.93
SCFD1-210ENST00000553693 EDEM3Q9BZQ6 932 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 ALDH8A1Q9H2A2 487 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-210ENST00000553693 SNX25Q9H3E2 840 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 CLEC5AQ9NY25 188 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 ANAPC11Q9NYG5 84 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 MYOM1P52179 1685 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 ARHGEF10O15013 1369 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 CLTCL1P53675 1640 aa2.97□□□□□ -1.93
SCFD1-210ENST00000553693 ABCA3Q99758 1704 aa2.96□□□□□ -1.93
SCFD1-210ENST00000553693 TECPR2O15040 1411 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 ARHGEF37A1IGU5 675 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 GLTPD2A6NH11 291 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 WDR46O15213 610 aaKnown RBP2.96□□□□□ -1.94
SCFD1-210ENST00000553693 TXNL1O43396 289 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 SLU7O95391 586 aaKnown RBP2.96□□□□□ -1.94
SCFD1-210ENST00000553693 MT-ND1P03886 318 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 THY1P04216 161 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 QDPRP09417 244 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 CCDC175P0C221 793 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 FAM200BP0CF97 657 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 ACAT1P24752 427 aaKnown RBP2.96□□□□□ -1.94
SCFD1-210ENST00000553693 TNNT3P45378 269 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-210ENST00000553693 GSK3BP49841 420 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 GRB14Q14449 540 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 ZRANB3Q5FWF4 1079 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 SUSD4Q5VX71 490 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 SHQ1Q6PI26 577 aaKnown RBP2.96□□□□□ -1.94
SCFD1-210ENST00000553693 CCBE1Q6UXH8 406 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-210ENST00000553693 CCDC186Q7Z3E2 898 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 ANKRD33Q7Z3H0 272 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 PRUNE1Q86TP1 453 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 DND1Q8IYX4 353 aaKnown RBP2.96□□□□□ -1.94
SCFD1-210ENST00000553693 SLC34A3Q8N130 599 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 ANKRD13CQ8N6S4 541 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 OR6J1Q8NGC5 347 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 SETD6Q8TBK2 473 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 GRK7Q8WTQ7 553 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 P2RX5Q93086 422 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 RMDN1Q96DB5 314 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 SIPA1Q96FS4 1042 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 RBM41Q96IZ5 413 aaKnown RBP2.96□□□□□ -1.94
SCFD1-210ENST00000553693 GDAP1L1Q96MZ0 367 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 APOL2Q9BQE5 337 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 GTPBP2Q9BX10 602 aaKnown RBP2.96□□□□□ -1.94
SCFD1-210ENST00000553693 MARCH7Q9H992 704 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 C3orf14Q9HBI5 128 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 IL1RAPQ9NPH3 570 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 NYAP2Q9P242 653 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms