RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 STARD8Q92502 1023 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 MR1Q95460 341 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 UCN3Q969E3 161 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 EXOSC8Q96B26 276 aaKnown RBP9.23□□□□□ -0.93
CHD8-204ENST00000553622 CSF3RQ99062 836 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 PRPF18Q99633 342 aaKnown RBP9.23□□□□□ -0.93
CHD8-204ENST00000553622 CCDC106Q9BWC9 280 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 NPLQ9BXD5 320 aaPredicted RBP9.23□□□□□ -0.93
CHD8-204ENST00000553622 REEP4Q9H6H4 257 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 LYRM4Q9HD34 91 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 WDR70Q9NW82 654 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 C5AR2Q9P296 337 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 DAPP1Q9UN19 280 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 MAPRE3Q9UPY8 281 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 ASB4Q9Y574 426 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 PCDHB3Q9Y5E6 796 aa9.23□□□□□ -0.93
CHD8-204ENST00000553622 TEX51A0A1B0GUA7 166 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 CCDC154A6NI56 674 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 H0YIG0 161 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 ANKRD28O15084 1053 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 ANGPT2O15123 496 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 PROM1O43490 865 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 PRMT3O60678 531 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 ERAL1O75616 437 aaKnown RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 UBOX5O94941 541 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 CBX6O95503 412 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 KLK3P07288 261 aaPredicted RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 SNRPB2P08579 225 aaKnown RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 FURINP09958 794 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 CD1EP15812 388 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 DDX5P17844 614 aaKnown RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 ADSLP30566 484 aaPredicted RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 RPL3P39023 403 aaKnown RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 XCR1P46094 333 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 CPA2P48052 419 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 DCDP81605 110 aaKnown RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 MXRA7P84157 204 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 PLIN5Q00G26 463 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 ID2Q02363 134 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 ABHD18Q0P651 414 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 FOXC1Q12948 553 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 CYLC2Q14093 348 aaPredicted RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 DSG2Q14126 1118 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 ERV3-1Q14264 604 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 VPS26BQ4G0F5 336 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 NKAIN1Q4KMZ8 207 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 SPANXN4Q5MJ08 99 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 MRM1Q6IN84 353 aaKnown RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 FAM180BQ6P0A1 224 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 SHISA5Q8N114 240 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 SLC38A9Q8NBW4 561 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 CIDECQ96AQ7 238 aaPredicted RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 VPS33AQ96AX1 596 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 KLHL29Q96CT2 875 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 SPDL1Q96EA4 605 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 MVB12AQ96EY5 273 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 OR52E6Q96RD3 313 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 DDA1Q9BW61 102 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 ASPSCR1Q9BZE9 553 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 ACTL8Q9H568 366 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 CLMPQ9H6B4 373 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 RPF2Q9H7B2 306 aaKnown RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 GIMAP4Q9NUV9 329 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 ARL8BQ9NVJ2 186 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 MS4A12Q9NXJ0 267 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 KCMF1Q9P0J7 381 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 IFT80Q9P2H3 777 aaPredicted RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 GPN3Q9UHW5 284 aaPredicted RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 UTS2RQ9UKP6 389 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 MRPS33Q9Y291 106 aaKnown RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 TMEM184BQ9Y519 407 aaPredicted RBP9.22□□□□□ -0.93
CHD8-204ENST00000553622 PCDHA9Q9Y5H5 950 aa9.22□□□□□ -0.93
CHD8-204ENST00000553622 SPTBN2O15020 2390 aa9.21□□□□□ -0.93
CHD8-204ENST00000553622 MYOCOSA0A1B0GUC4 107 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 A0A1W2PNU3 283 aaPredicted RBP9.21□□□□□ -0.94
CHD8-204ENST00000553622 C1orf226A1L170 272 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 ERICH4A6NGS2 130 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 WASHC1A8K0Z3 465 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 GABRR3A8MPY1 467 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 CAPN14A8MX76 684 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 C9J4A7 227 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 MEN1O00255 615 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 PGRMC2O15173 223 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 SLC22A2O15244 555 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 CFLARO15519 480 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 RRP9O43818 475 aaKnown RBP9.21□□□□□ -0.94
CHD8-204ENST00000553622 STK17BO94768 372 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 C8orf89P0DMQ9 161 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 LAMP1P11279 417 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 PIM1P11309 404 aaPredicted RBP9.21□□□□□ -0.94
CHD8-204ENST00000553622 ESRRAP11474 423 aaPredicted RBP9.21□□□□□ -0.94
CHD8-204ENST00000553622 COX4I1P13073 169 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 DRD2P14416 443 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 PCSK2P16519 638 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 ITGAXP20702 1163 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 DDCP20711 480 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 RBMS1P29558 406 aaKnown RBP9.21□□□□□ -0.94
CHD8-204ENST00000553622 KIR3DL1P43629 444 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 GCGRP47871 477 aa9.21□□□□□ -0.94
CHD8-204ENST00000553622 MRPL19P49406 292 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms