RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 FAM92BQ6ZTR7 304 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 ZZZ3Q8IYH5 903 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 CSNK1A1LQ8N752 337 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 LRTOMTQ8WZ04 291 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 KLHL6Q8WZ60 621 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 ZC3H10Q96K80 434 aaKnown RBP18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 DPH2Q9BQC3 489 aaPredicted RBP18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 EFHD1Q9BUP0 239 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 ROGDIQ9GZN7 287 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 RAB33BQ9H082 229 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 CXorf36Q9H7Y0 433 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 SLC35C2Q9NQQ7 365 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 ACSS1Q9NUB1 689 aaPredicted RBP18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 LYARQ9NX58 379 aaKnown RBP18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 KCMF1Q9P0J7 381 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 UTS2RQ9UKP6 389 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 ACSL6Q9UKU0 697 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 CORO2BQ9UQ03 480 aa18.52■□□□□ 0.56
RBFOX1-215ENST00000553186 TP53BP1Q12888 1972 aaPredicted RBP18.52■□□□□ 0.55
RBFOX1-215ENST00000553186 GMNNO75496 209 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 MANFP55145 182 aaKnown RBP18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 GFERP55789 205 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 VSX2P58304 361 aaPredicted RBP18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 C16orf72Q14CZ0 275 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 MLC1Q15049 377 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 LRRC36Q1X8D7 754 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 TBCELQ5QJ74 424 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 WLSQ5T9L3 541 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 OGFRL1Q5TC84 451 aaPredicted RBP18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 PEAR1Q5VY43 1037 aaPredicted RBP18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 ABHD13Q7L211 337 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 KANSL1Q7Z3B3 1105 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 DTWD2Q8NBA8 298 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 PAPD5Q8NDF8 572 aaKnown RBP18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 NETO1Q8TDF5 533 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 PIGKQ92643 395 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 ZBED6CLQ96FA7 236 aaPredicted RBP18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 SERINC2Q96SA4 455 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 EPHA6Q9UF33 1036 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 FBXO4Q9UKT5 387 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 TNRC6BQ9UPQ9 1833 aaKnown RBP18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 CREG1O75629 220 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 TIPRLO75663 272 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 CTSBP07858 339 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 NUDT7P0C024 238 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 ALOX12P18054 663 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 IL1RNP18510 177 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 ALDH4A1P30038 563 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 VMACQ2NL98 169 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 DEFB110Q30KQ9 67 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 COX20Q5RI15 118 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 NKAIN2Q5VXU1 208 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 SLC48A1Q6P1K1 146 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 ARHGEF39Q8N4T4 335 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 DNAJC22Q8N4W6 341 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 ZNF655Q8N720 491 aaPredicted RBP18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 OR5AK3PQ8NH89 298 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 PSMA8Q8TAA3 256 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 EPS8L2Q9H6S3 715 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 SIRT3Q9NTG7 399 aaPredicted RBP18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 ANAPC2Q9UJX6 822 aa18.51■□□□□ 0.55
RBFOX1-215ENST00000553186 DNAJB6O75190 326 aa18.5■□□□□ 0.55
RBFOX1-215ENST00000553186 C9P02748 559 aa18.5■□□□□ 0.55
RBFOX1-215ENST00000553186 RETP07949 1114 aa18.5■□□□□ 0.55
RBFOX1-215ENST00000553186 GLB1P16278 677 aa18.5■□□□□ 0.55
RBFOX1-215ENST00000553186 IL10P22301 178 aa18.5■□□□□ 0.55
RBFOX1-215ENST00000553186 EPHA8P29322 1005 aaPredicted RBP18.5■□□□□ 0.55
RBFOX1-215ENST00000553186 HMBOX1Q6NT76 420 aa18.5■□□□□ 0.55
RBFOX1-215ENST00000553186 OR52N2Q8NGI0 321 aa18.5■□□□□ 0.55
RBFOX1-215ENST00000553186 TCTN2Q96GX1 697 aa18.5■□□□□ 0.55
RBFOX1-215ENST00000553186 SPATA9Q9BWV2 254 aa18.5■□□□□ 0.55
RBFOX1-215ENST00000553186 TMEM121BQ9BXQ6 578 aaPredicted RBP18.5■□□□□ 0.55
RBFOX1-215ENST00000553186 NEUROD4Q9HD90 331 aa18.5■□□□□ 0.55
RBFOX1-215ENST00000553186 FSCN3Q9NQT6 498 aa18.5■□□□□ 0.55
RBFOX1-215ENST00000553186 A0A1B0GTQ1 180 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 UQCRC2P22695 453 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 OR1D5P58170 312 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 RUNX2Q13950 521 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 ERICH5Q6P6B1 374 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 PRSS41Q7RTY9 318 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 ERMP1Q7Z2K6 904 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 MCATQ8IVS2 390 aaKnown RBP18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 FAM86B1Q8N7N1 296 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 CNRIP1Q96F85 164 aaPredicted RBP18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 AMDHD1Q96NU7 426 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 TGM7Q96PF1 710 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 CCDC3Q9BQI4 270 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 GLIPR2Q9H4G4 154 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 STARD5Q9NSY2 213 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 DCAF13Q9NV06 445 aaKnown RBP18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 DAPP1Q9UN19 280 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 IGHV1OR21-1A0A087WYE8 117 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 TLCD2A6NGC4 264 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 HNRNPRO43390 633 aaKnown RBP18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 MYF5P13349 255 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 HSPB3Q12988 150 aa18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 COL9A2Q14055 689 aaPredicted RBP18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 ZC3H12BQ5HYM0 836 aaKnown RBP18.49■□□□□ 0.55
RBFOX1-215ENST00000553186 PDSS2Q86YH6 399 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms