RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 CHIT1Q13231 466 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 DRP2Q13474 957 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 ZKSCAN8Q15776 578 aaPredicted RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 ANKRD55Q3KP44 614 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 LRRC37A5PQ49AS3 106 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 NADK2Q4G0N4 442 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 TMEM41BQ5BJD5 291 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 WDR38Q5JTN6 314 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 SPATA46Q5T0L3 261 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 LIPJQ5W064 366 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 SLC25A47Q6Q0C1 308 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 CUZD1Q86UP6 607 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 C17orf64Q86WR6 236 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 CACUL1Q86Y37 369 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 GRAMD2AQ8IUY3 354 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 CIARTQ8N365 385 aaPredicted RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 METTL27Q8N6F8 245 aaPredicted RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 COLGALT1Q8NBJ5 622 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 ADAD2Q8NCV1 583 aaKnown RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 SMPDL3AQ92484 453 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 FCGR1BQ92637 280 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 CASP10Q92851 521 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 HIST1H2ACQ93077 130 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 SENP5Q96HI0 755 aaPredicted RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 IGSF21Q96ID5 467 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 RPGRIP1Q96KN7 1286 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 CXorf58Q96LI9 332 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 DUX5Q96PT3 197 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 FUNDC2Q9BWH2 189 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 ZNF416Q9BWM5 594 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 POLR1EQ9GZS1 481 aaKnown RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 ATP13A3Q9H7F0 1226 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 RMND5AQ9H871 391 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 CD93Q9NPY3 652 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 YAE1D1Q9NRH1 226 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 ATAD3AQ9NVI7 634 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 HACD3Q9P035 362 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 POMT2Q9UKY4 750 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 DIMT1Q9UNQ2 313 aaKnown RBP3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 WDR37Q9Y2I8 494 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 PPP2R2CQ9Y2T4 447 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 RNF115Q9Y4L5 304 aa3.58□□□□□ -1.84
LSM6P2-201ENST00000552208 SH3PXD2BA1X283 911 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 DENND3A2RUS2 1198 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 RNF222A6NCQ9 220 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 NKX6-3A6NJ46 265 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 LMO7DNF2Z398 122 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 C16orf97H3BN30 126 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 E2F3O00716 465 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 EPHB6O15197 1021 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 EXTL3O43909 919 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 NADKO95544 446 aaPredicted RBP3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 EML2O95834 649 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 NGFRP08138 427 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 CALCBP10092 127 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 RRASP10301 218 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 PDHBP11177 359 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 DRD5P21918 477 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 GPX3P22352 226 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 HNRNPA2B1P22626 353 aaKnown RBP3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 MARK3P27448 753 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 OTX2P32243 289 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 OR3A2P47893 321 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 ART1P52961 327 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 METAP1P53582 386 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 SNTB2Q13425 540 aaKnown RBP3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 GPM6BQ13491 265 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 ZNF74Q16587 644 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 MAJINQ3KP22 176 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 LIPKQ5VXJ0 399 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 AWAT2Q6E213 333 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 PRSS57Q6UWY2 283 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 VASH2Q86V25 355 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 WDR49Q8IV35 697 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 MISPQ8IVT2 679 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 CCDC185Q8N715 623 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 KLHDC9Q8NEP7 349 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 KBTBD8Q8NFY9 601 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 OR13A1Q8NGR1 328 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 SECTM1Q8WVN6 248 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 SHC3Q92529 594 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 SUSD6Q92537 303 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 PHYHIPQ92561 330 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 MCHR2Q969V1 340 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 TMEM204Q9BSN7 226 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 C1QTNF4Q9BXJ3 329 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 FAM49AQ9H0Q0 323 aaPredicted RBP3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 GORASP2Q9H8Y8 452 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 ZNF624Q9P2J8 865 aaPredicted RBP3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 LHX3Q9UBR4 397 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 POLKQ9UBT6 870 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 MRTO4Q9UKD2 239 aaKnown RBP3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 FAF1Q9UNN5 650 aaPredicted RBP3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 FOXJ3Q9UPW0 622 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 KLHDC2Q9Y2U9 406 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 MAB21L2Q9Y586 359 aa3.57□□□□□ -1.84
LSM6P2-201ENST00000552208 GLTPD2A6NH11 291 aa3.56□□□□□ -1.84
LSM6P2-201ENST00000552208 YJEFN3A6XGL0 299 aa3.56□□□□□ -1.84
LSM6P2-201ENST00000552208 ANKRD30BLA7E2S9 258 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms