RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 RAB14P61106 215 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 TGFB2P61812 414 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 UFM1P61960 85 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 RPS8P62241 208 aaKnown RBP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 HERVK_113P63132 956 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 CAP1Q01518 475 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 LGALS3BPQ08380 585 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 NPRL3Q12980 569 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 DUSP4Q13115 394 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 GPR17Q13304 367 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 SIM2Q14190 667 aaPredicted RBP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 PUM1Q14671 1186 aaKnown RBP eCLIP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 GUCA2BQ16661 112 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 EIF2S3LQ2VIR3 472 aaKnown RBP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 C3orf38Q5JPI3 329 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 C10orf91Q5T1B1 145 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM171A1Q5VUB5 890 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 ATG9BQ674R7 924 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 ANKS6Q68DC2 871 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 CLEC6AQ6EIG7 209 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 DHRS7BQ6IAN0 325 aaPredicted RBP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 EFCAB12Q6NXP0 572 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 CASC4Q6P4E1 433 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 PKN3Q6P5Z2 889 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 UNC5DQ6UXZ4 953 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 ZPBP2Q6X784 338 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 CATSPERGQ6ZRH7 1159 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 RNF165Q6ZSG1 346 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 TMEM179Q6ZVK1 233 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 RAB11FIP2Q7L804 512 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 KDELC2Q7Z4H8 507 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 ABI3BPQ7Z7G0 1075 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 GLCCI1Q86VQ1 547 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 PAQR7Q86WK9 346 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC43A2Q8N370 569 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 TMEM132CQ8N3T6 1108 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 IL17RCQ8NAC3 791 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 AGBL3Q8NEM8 1001 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 IPMKQ8NFU5 416 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 RDM1Q8NG50 284 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 OR52K1Q8NGK4 314 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 GPR150Q8NGU9 434 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 OR2T11Q8NH01 316 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 CLHC1Q8NHS4 586 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 PROKR1Q8TCW9 393 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 TWIST2Q8WVJ9 160 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 ADAMTS14Q8WXS8 1223 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 PHF21AQ96BD5 680 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 P2RY11Q96G91 374 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 TCTN2Q96GX1 697 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 PYURFQ96I23 114 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF599Q96NL3 588 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 TSGA13Q96PP4 275 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM193BQ96PV7 902 aaPredicted RBP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 DMRTA2Q96SC8 542 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 MGLLQ99685 303 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 APOL2Q9BQE5 337 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 KATNAL1Q9BW62 490 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 PAPOLGQ9BWT3 736 aaKnown RBP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 ERVK-6Q9BXR3 956 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 EGLN1Q9GZT9 426 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 ELOVL6Q9H5J4 265 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM124BQ9H5Z6 455 aaPredicted RBP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 NSUN3Q9H649 340 aaKnown RBP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 AGO4Q9HCK5 861 aaKnown RBP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 ABCB9Q9NP78 766 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 B3GAT2Q9NPZ5 323 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 KMT5AQ9NQR1 393 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 DLL4Q9NR61 685 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 TMLHEQ9NVH6 421 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 GPATCH2LQ9NWQ4 482 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 TFCP2L1Q9NZI6 479 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 CD274Q9NZQ7 290 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 EXTL2Q9UBQ6 330 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 GIMAP2Q9UG22 337 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 DUSP13Q9UII6 198 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 SCP2D1Q9UJQ7 156 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 NDRG2Q9UN36 371 aaKnown RBP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 BAIAP2Q9UQB8 552 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 ERVK-19Q9WJR5 959 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 PCDHGA2Q9Y5H1 932 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 ORC6Q9Y5N6 252 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 CFAP20Q9Y6A4 193 aaKnown RBP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 COL2A1P02458 1487 aaPredicted RBP5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 LY75O60449 1722 aa5.06□□□□□ -1.6
LSM3P2-201ENST00000551246 LOC100506127A0A0U1RQW1 187 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 C9orf170A2RU37 121 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 FABP12A6NFH5 140 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 WRBO00258 174 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 KPNA3O00505 521 aaPredicted RBP5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 CXCR6O00574 342 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 PDCD5O14737 125 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 CHMP2AO43633 222 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 VEGFDO43915 354 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 KLK8O60259 260 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 RAD1O60671 282 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 TPST2O60704 377 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 CREG1O75629 220 aa5.05□□□□□ -1.6
LSM3P2-201ENST00000551246 CYP17A1P05093 508 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms