RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 CCDC189A1A4V9 331 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 SYCE1LA8MT33 242 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 ZNHIT1O43257 154 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 NME2P1O60361 137 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 ZNF354AO60765 605 aaPredicted RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 ZG16O60844 167 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 CTNSO60931 367 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 PRKRAO75569 313 aaKnown RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 UNC5CO95185 931 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 GFAPP14136 432 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 EPB42P16452 691 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 NME2P22392 152 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 PHBP35232 272 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 PIK3CGP48736 1102 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 HLCSP50747 726 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 HNRNPH2P55795 449 aaKnown RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 RPS13P62277 151 aaKnown RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 IGLV3-21P80748 117 aaPredicted RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 ID2Q02363 134 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 OC90Q02509 493 aaPredicted RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 TRAF3Q13114 568 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 SLC13A2Q13183 592 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 DDX39BQ13838 428 aaKnown RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 GTF2H2Q13888 395 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 ZNF787Q6DD87 383 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 MRM1Q6IN84 353 aaKnown RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 GTF2H2CQ6P1K8 395 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 GFRALQ6UXV0 394 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 DGAT2L6Q6ZPD8 337 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 RPS27LQ71UM5 84 aaKnown RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 FGD2Q7Z6J4 655 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 PTGR2Q8N8N7 351 aaPredicted RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 L3MBTL4Q8NA19 623 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 OR52B6Q8NGF0 335 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 UCN3Q969E3 161 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 RELTQ969Z4 430 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 MTERF1Q99551 399 aaKnown RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 TXLNGYQ9BZA5 131 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 COPS7BQ9H9Q2 264 aaPredicted RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 LIN28AQ9H9Z2 209 aaKnown RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 CPSF2Q9P2I0 782 aaKnown RBP12.13□□□□□ -0.47
NPAS3-209ENST00000551008 XPR1Q9UBH6 696 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 VTI1BQ9UEU0 232 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 PCTPQ9UKL6 214 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 FREM3P0C091 2139 aa12.13□□□□□ -0.47
NPAS3-209ENST00000551008 A0A088AWK7 358 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 WASHC1A8K0Z3 465 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 TRIM49D1C9J1S8 452 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 H0YIV9 168 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 TMPRSS11DO60235 418 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 FGF17O60258 216 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 EEDO75530 441 aaKnown RBP12.12□□□□□ -0.47
NPAS3-209ENST00000551008 SLC25A12O75746 678 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 CRYABP02511 175 aaKnown RBP12.12□□□□□ -0.47
NPAS3-209ENST00000551008 INHBAP08476 426 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 FAM153BP0C7A2 387 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 ZNF10P21506 573 aaPredicted RBP12.12□□□□□ -0.47
NPAS3-209ENST00000551008 BSGP35613 385 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 PIK3CBP42338 1070 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 NR0B1P51843 470 aaKnown RBP12.12□□□□□ -0.47
NPAS3-209ENST00000551008 ELAVL1Q15717 326 aaKnown RBP12.12□□□□□ -0.47
NPAS3-209ENST00000551008 HIST2H2ACQ16777 129 aaPredicted RBP12.12□□□□□ -0.47
NPAS3-209ENST00000551008 FAM153CQ494X1 144 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 TMEM35AQ53FP2 167 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 GLE1Q53GS7 698 aaKnown RBP12.12□□□□□ -0.47
NPAS3-209ENST00000551008 LIPJQ5W064 366 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 C18orf63Q68DL7 685 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 HIST2H2AA3Q6FI13 130 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 SLC25A25Q6KCM7 469 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 MDGA2Q7Z553 956 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.12□□□□□ -0.47
NPAS3-209ENST00000551008 FJX1Q86VR8 437 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 CPSF7Q8N684 471 aaKnown RBP12.12□□□□□ -0.47
NPAS3-209ENST00000551008 MNS1Q8NEH6 495 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 ARMC2Q8NEN0 867 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 SUN3Q8TAQ9 357 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 SREK1Q8WXA9 508 aaKnown RBP12.12□□□□□ -0.47
NPAS3-209ENST00000551008 UBE2E3Q969T4 207 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 CMTM7Q96FZ5 175 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 VMP1Q96GC9 406 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 CDK15Q96Q40 435 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 ALOXE3Q9BYJ1 711 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 DEFB126Q9BYW3 111 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 IPPKQ9H8X2 491 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 SEC14L3Q9UDX4 400 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 ZNF180Q9UJW8 692 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 NFU1Q9UMS0 254 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 ZNF835Q9Y2P0 537 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 ATG4BQ9Y4P1 393 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 PKDREJQ9NTG1 2253 aa12.12□□□□□ -0.47
NPAS3-209ENST00000551008 NINQ8N4C6 2090 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 A0A0A6YYD5 115 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 A0A0G2JMM0 328 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 A0A1W2PPB8 328 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 A0A1W2PRS3 328 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 A0A1W2PS29 197 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 KIR3DP1A8MWS1 328 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 POC1B-GALNT4F8VUJ3 575 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 HRKO00198 91 aa12.11□□□□□ -0.47
NPAS3-209ENST00000551008 PPP6CO00743 305 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms