RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 TMEFF2Q9UIK5 374 aaPredicted RBP19.89■□□□□ 0.77
PRDM4-205ENST00000550376 RAB23Q9ULC3 237 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 CORO2BQ9UQ03 480 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 PCDHGA4Q9Y5G9 962 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 FRYLO94915 3013 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 CCDC160A6NGH7 325 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 PRAMEF25A6NGN4 478 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 DNAJB6O75190 326 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 DUSP2Q05923 314 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 TP53BP2Q13625 1128 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 CNPY1Q3B7I2 92 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 ABHD17CQ6PCB6 329 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 OR52J3Q8NH60 311 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 C7orf34Q96L11 122 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 FAM118AQ9NWS6 357 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 OR6C2Q9NZP2 312 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 BAG5Q9UL15 447 aa19.89■□□□□ 0.77
PRDM4-205ENST00000550376 A0A0J9YVX5 310 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 C9P02748 559 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 IL1RNP18510 177 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 MAOBP27338 520 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 PRKAG1P54619 331 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 PCBP4P57723 403 aaKnown RBP19.88■□□□□ 0.77
PRDM4-205ENST00000550376 PPP1CAP62136 330 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 IQCCQ4KMZ1 466 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 TRIM40Q6P9F5 258 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 USP51Q70EK9 711 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 ZNF438Q7Z4V0 828 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 PATL1Q86TB9 770 aaKnown RBP19.88■□□□□ 0.77
PRDM4-205ENST00000550376 TRIM48Q8IWZ4 208 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 SGCDQ92629 289 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 YIPF4Q9BSR8 244 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 POLMQ9NP87 494 aaPredicted RBP19.88■□□□□ 0.77
PRDM4-205ENST00000550376 SIRT3Q9NTG7 399 aaPredicted RBP19.88■□□□□ 0.77
PRDM4-205ENST00000550376 SAMHD1Q9Y3Z3 626 aaKnown RBP19.88■□□□□ 0.77
PRDM4-205ENST00000550376 AP1M2Q9Y6Q5 423 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 ZW10O43264 779 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 CTSVO60911 334 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 HIST1H1TP22492 207 aaPredicted RBP19.88■□□□□ 0.77
PRDM4-205ENST00000550376 UQCRC2P22695 453 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 FEN1P39748 380 aaKnown RBP19.88■□□□□ 0.77
PRDM4-205ENST00000550376 BTN3A2P78410 334 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 ILF3Q12906 894 aaKnown RBP eCLIP19.88■□□□□ 0.77
PRDM4-205ENST00000550376 SMAD4Q13485 552 aaKnown RBP19.88■□□□□ 0.77
PRDM4-205ENST00000550376 ZNF425Q6IV72 752 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 FBXO42Q6P3S6 717 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 LPCAT2Q7L5N7 544 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 VN1R4Q7Z5H5 301 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 DCP2Q8IU60 420 aaKnown RBP19.88■□□□□ 0.77
PRDM4-205ENST00000550376 TMEFF1Q8IYR6 380 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 ARL10Q8N8L6 244 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 NMD3Q96D46 503 aaKnown RBP19.88■□□□□ 0.77
PRDM4-205ENST00000550376 QRFPRQ96P65 431 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 ASPSCR1Q9BZE9 553 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 EPS8L2Q9H6S3 715 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 ADPRHL2Q9NX46 363 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 PDP1Q9P0J1 537 aaPredicted RBP19.88■□□□□ 0.77
PRDM4-205ENST00000550376 SH3GLB1Q9Y371 365 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 TESMINQ9Y4I5 508 aa19.88■□□□□ 0.77
PRDM4-205ENST00000550376 SCN2AQ99250 2005 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 NINQ8N4C6 2090 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 J3KTA2 159 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 KIF1CO43896 1103 aaKnown RBP19.87■□□□□ 0.77
PRDM4-205ENST00000550376 PABPC4LP0CB38 370 aaKnown RBP19.87■□□□□ 0.77
PRDM4-205ENST00000550376 IL7RP16871 459 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 ATP5A1P25705 553 aaKnown RBP19.87■□□□□ 0.77
PRDM4-205ENST00000550376 EEF1A2Q05639 463 aaKnown RBP19.87■□□□□ 0.77
PRDM4-205ENST00000550376 SFSWAPQ12872 951 aaKnown RBP19.87■□□□□ 0.77
PRDM4-205ENST00000550376 EIF2B5Q13144 721 aaKnown RBP19.87■□□□□ 0.77
PRDM4-205ENST00000550376 SLC9A5Q14940 896 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 TMEM26Q6ZUK4 368 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 C6orf120Q7Z4R8 191 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 CCDC116Q8IYX3 515 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 SVOPLQ8N434 492 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 OR5D16Q8NGK9 328 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 ZFP28Q8NHY6 868 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 OR2A14Q96R47 310 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 RBM4BQ9BQ04 359 aaKnown RBP19.87■□□□□ 0.77
PRDM4-205ENST00000550376 DOHHQ9BU89 302 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 RBM4Q9BWF3 364 aaKnown RBP19.87■□□□□ 0.77
PRDM4-205ENST00000550376 RSPO3Q9BXY4 272 aaPredicted RBP19.87■□□□□ 0.77
PRDM4-205ENST00000550376 FOXQ1Q9C009 403 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 GLIPR2Q9H4G4 154 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 RUBCNLQ9H714 662 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 DMDP11532 3685 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 ENO4A6NNW6 628 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 H3BSA7 217 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 SOX1O00570 391 aaPredicted RBP19.87■□□□□ 0.77
PRDM4-205ENST00000550376 THEGLP0DJG4 465 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 C7P10643 843 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 EPHA2P29317 976 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 DAPP51397 102 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 SELENOWP63302 87 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 ABATP80404 500 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 LRRC74AQ0VAA2 488 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 TDGQ13569 410 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 SIM2Q14190 667 aaPredicted RBP19.87■□□□□ 0.77
PRDM4-205ENST00000550376 FLVCR1-AS1Q8TAF5 88 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 ZCCHC10Q8TBK6 192 aa19.87■□□□□ 0.77
PRDM4-205ENST00000550376 PITHD1Q9GZP4 211 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms