RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 PRSS44E7EML9 344 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 ZNHIT1O43257 154 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 LDB3O75112 727 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 ZFAND5O76080 213 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 HIST1H1TP22492 207 aaPredicted RBP15.21■□□□□ 0.03
VPS29-207ENST00000549970 TYK2P29597 1187 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 SERPINB8P50452 374 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 GPR143P51810 404 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 ID2Q02363 134 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 SETDB1Q15047 1291 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 ACAP2Q15057 778 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 PFKFB4Q16877 469 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 WHAMMP3Q1A5X7 153 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 TMEM35AQ53FP2 167 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 RNFT1Q5M7Z0 435 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 C16orf47Q6ZP98 133 aaPredicted RBP15.21■□□□□ 0.03
VPS29-207ENST00000549970 CHSY3Q70JA7 882 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 CCDC91Q7Z6B0 441 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 ITLN2Q8WWU7 325 aaPredicted RBP15.21■□□□□ 0.03
VPS29-207ENST00000549970 ZNF592Q92610 1267 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 DAZLQ92904 295 aaKnown RBP15.21■□□□□ 0.03
VPS29-207ENST00000549970 CMTM7Q96FZ5 175 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 SORBS1Q9BX66 1292 aaKnown RBP15.21■□□□□ 0.03
VPS29-207ENST00000549970 VPS11Q9H270 941 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 OR51B5Q9H339 312 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 ACSS3Q9H6R3 686 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 MTRF1LQ9UGC7 380 aaKnown RBP15.21■□□□□ 0.03
VPS29-207ENST00000549970 KLF13Q9Y2Y9 288 aaPredicted RBP15.21■□□□□ 0.03
VPS29-207ENST00000549970 SPACA6W5XKT8 324 aa15.21■□□□□ 0.03
VPS29-207ENST00000549970 PCNX1Q96RV3 2341 aa15.21■□□□□ 0.02
VPS29-207ENST00000549970 ITPR2Q14571 2701 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 ARHGAP10A1A4S6 786 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 SYNDIG1LA6NDD5 238 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 LRRC14BA6NHZ5 514 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 ASNA1O43681 348 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 KLHL2O95198 593 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 ACSL3O95573 720 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 ALDOAP04075 364 aaKnown RBP15.2■□□□□ 0.02
VPS29-207ENST00000549970 ESRRAP11474 423 aaPredicted RBP15.2■□□□□ 0.02
VPS29-207ENST00000549970 TNNI3P19429 210 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 CPN2P22792 545 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 SERPINB1P30740 379 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 RFC3P40938 356 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 MEOX1P50221 254 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 SSR4P51571 173 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 HSF1Q00613 529 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 PCDH1Q08174 1060 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 NAA30Q147X3 362 aaPredicted RBP15.2■□□□□ 0.02
VPS29-207ENST00000549970 KHDRBS2Q5VWX1 349 aaKnown RBP15.2■□□□□ 0.02
VPS29-207ENST00000549970 MTFR2Q6P444 385 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 KLC3Q6P597 504 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 MRGPRGQ86SM5 289 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 SPPL2CQ8IUH8 684 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 SULF2Q8IWU5 870 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 OR14A16Q8NHC5 309 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 HUS1BQ8NHY5 278 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 MTERF1Q99551 399 aaKnown RBP15.2■□□□□ 0.02
VPS29-207ENST00000549970 OR8D2Q9GZM6 311 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 CDC42EP4Q9H3Q1 356 aaKnown RBP15.2■□□□□ 0.02
VPS29-207ENST00000549970 ACTR8Q9H981 624 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 CPSF2Q9P2I0 782 aaKnown RBP15.2■□□□□ 0.02
VPS29-207ENST00000549970 VTI1BQ9UEU0 232 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 DMGDHQ9UI17 866 aaKnown RBP15.2■□□□□ 0.02
VPS29-207ENST00000549970 GTF3C1Q12789 2109 aa15.2■□□□□ 0.02
VPS29-207ENST00000549970 TMEM200CA6NKL6 621 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 C17orf105B2RV13 164 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 OR2J2O76002 312 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 SCELO95171 688 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 ABOP16442 354 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 RAP1GDS1P52306 607 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 ALDH18A1P54886 795 aaKnown RBP15.19■□□□□ 0.02
VPS29-207ENST00000549970 GPR85P60893 370 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 SERTAD2Q14140 314 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 DEPDC1Q5TB30 811 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 OR4C11Q6IEV9 310 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 HSDL2Q6YN16 418 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 CEP128Q6ZU80 1094 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 MDGA2Q7Z553 956 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 GHDCQ8N2G8 530 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 ZNF321PQ8N8H1 164 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 NOA1Q8NC60 698 aaKnown RBP15.19■□□□□ 0.02
VPS29-207ENST00000549970 MORN4Q8NDC4 146 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 PTPMT1Q8WUK0 201 aaPredicted RBP15.19■□□□□ 0.02
VPS29-207ENST00000549970 GPR78Q96P69 363 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 DMRT3Q9NQL9 472 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 ADGRE2Q9UHX3 823 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 ERVK-11Q9UQG0 969 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 ENTPD4Q9Y227 616 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 ZNF835Q9Y2P0 537 aa15.19■□□□□ 0.02
VPS29-207ENST00000549970 YARS2Q9Y2Z4 477 aaKnown RBP15.19■□□□□ 0.02
VPS29-207ENST00000549970 CCDC189A1A4V9 331 aa15.18■□□□□ 0.02
VPS29-207ENST00000549970 A8MVJ9 347 aa15.18■□□□□ 0.02
VPS29-207ENST00000549970 KLRC4-KLRK1H3BQV0 150 aa15.18■□□□□ 0.02
VPS29-207ENST00000549970 WWP2O00308 870 aa15.18■□□□□ 0.02
VPS29-207ENST00000549970 TFECO14948 347 aaPredicted RBP15.18■□□□□ 0.02
VPS29-207ENST00000549970 PEX1O43933 1283 aa15.18■□□□□ 0.02
VPS29-207ENST00000549970 KLK8O60259 260 aa15.18■□□□□ 0.02
VPS29-207ENST00000549970 SIX3O95343 332 aaPredicted RBP15.18■□□□□ 0.02
VPS29-207ENST00000549970 INHBAP08476 426 aa15.18■□□□□ 0.02
VPS29-207ENST00000549970 RPS13P62277 151 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms