RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 EPS8L3Q8TE67 593 aaKnown RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 ZNF483Q8TF39 744 aaPredicted RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 UBLCP1Q8WVY7 318 aaPredicted RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 CMTM7Q96FZ5 175 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 KCNC2Q96PR1 638 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 HBEGFQ99075 208 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 TBCDQ9BTW9 1192 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 MRPL46Q9H2W6 279 aaKnown RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 LIN28AQ9H9Z2 209 aaKnown RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 PSMC3IPQ9P2W1 217 aaPredicted RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 ATG4BQ9Y4P1 393 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 MMACHCQ9Y4U1 282 aa9.14□□□□□ -0.95
HDAC7-229ENST00000549883 TNPO3Q9Y5L0 923 aaKnown RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 V9GYY5 206 aaPredicted RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 USP9XQ93008 2570 aaPredicted RBP9.14□□□□□ -0.95
HDAC7-229ENST00000549883 DIDO1Q9BTC0 2240 aaKnown RBP9.13□□□□□ -0.95
HDAC7-229ENST00000549883 PTPN13Q12923 2485 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 GLOD5A6NK44 160 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 TMEM200CA6NKL6 621 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 GABRR3A8MPY1 467 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 FGF17O60258 216 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 OR4F21O95013 312 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 MST1P26927 711 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 TPP2P29144 1249 aaPredicted RBP9.13□□□□□ -0.95
HDAC7-229ENST00000549883 ARL1P40616 181 aaPredicted RBP9.13□□□□□ -0.95
HDAC7-229ENST00000549883 PIK3CBP42338 1070 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 CCNG1P51959 295 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 HSD17B7P56937 341 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 VSNL1P62760 191 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 TMEM35AQ53FP2 167 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 ZNF324BQ6AW86 544 aaPredicted RBP9.13□□□□□ -0.95
HDAC7-229ENST00000549883 SPINK14Q6IE38 97 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 RPS19BP1Q86WX3 136 aaKnown RBP9.13□□□□□ -0.95
HDAC7-229ENST00000549883 ZNF595Q8IYB9 648 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 MDS2Q8NDY4 140 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 B3GNT7Q8NFL0 401 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 TRPC4APQ8TEL6 797 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 PTPMT1Q8WUK0 201 aaPredicted RBP9.13□□□□□ -0.95
HDAC7-229ENST00000549883 FAR1Q8WVX9 515 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 UBE2E3Q969T4 207 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 NCLNQ969V3 563 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 ATP6V1E2Q96A05 226 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 RGMAQ96B86 450 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 ZNF354BQ96LW1 612 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 TMEM237Q96Q45 408 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 NTMT1Q9BV86 223 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 ALOXE3Q9BYJ1 711 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 RNF32Q9H0A6 362 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 LYRM4Q9HD34 91 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 KLHL1Q9NR64 748 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 TSC22D4Q9Y3Q8 395 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 PCDHGA11Q9Y5H2 935 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 MYO7BQ6PIF6 2116 aa9.13□□□□□ -0.95
HDAC7-229ENST00000549883 FLNBO75369 2602 aaKnown RBP9.12□□□□□ -0.95
HDAC7-229ENST00000549883 A0A088AWK7 358 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 A0A0A6YYD5 115 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 TRAV17A0A0B4J275 112 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 IQANK1A0A1B0GTG1 560 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 A0A1W2PR48 441 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 ANKUB1A6NFN9 424 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 HRKO00198 91 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 CLDN4O14493 209 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 ZNHIT1O43257 154 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 UGDHO60701 494 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 ZNF354AO60765 605 aaPredicted RBP9.12□□□□□ -0.95
HDAC7-229ENST00000549883 CTNSO60931 367 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 IFNA16P05015 189 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 CHN1P15882 459 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 ZNF10P21506 573 aaPredicted RBP9.12□□□□□ -0.95
HDAC7-229ENST00000549883 CPN2P22792 545 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 PTX3P26022 381 aaPredicted RBP9.12□□□□□ -0.95
HDAC7-229ENST00000549883 TNFRSF8P28908 595 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 HSD17B3P37058 310 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 RAP1GDS1P52306 607 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 MLF1P58340 268 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 TGM3Q08188 693 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 GTF3C1Q12789 2109 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 OR1C1Q15619 314 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 MEP1AQ16819 746 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 ZNF678Q5SXM1 525 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 LGSNQ5TDP6 509 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 FRG2Q64ET8 278 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 HIST2H2BCQ6DN03 193 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 MRM1Q6IN84 353 aaKnown RBP9.12□□□□□ -0.95
HDAC7-229ENST00000549883 MILR1Q7Z6M3 343 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 MMP21Q8N119 569 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 EIF1ADQ8N9N8 165 aaKnown RBP9.12□□□□□ -0.95
HDAC7-229ENST00000549883 SRFBP1Q8NEF9 429 aaKnown RBP9.12□□□□□ -0.95
HDAC7-229ENST00000549883 PPWD1Q96BP3 646 aaKnown RBP9.12□□□□□ -0.95
HDAC7-229ENST00000549883 ZBTB9Q96C00 473 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 MTBPQ96DY7 904 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 FRG2BQ96QU4 278 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 C1QTNF3Q9BXJ4 246 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 MRPL1Q9BYD6 325 aaKnown RBP9.12□□□□□ -0.95
HDAC7-229ENST00000549883 DDX31Q9H8H2 851 aaKnown RBP9.12□□□□□ -0.95
HDAC7-229ENST00000549883 ADGRE2Q9UHX3 823 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 TMCO1Q9UM00 188 aa9.12□□□□□ -0.95
HDAC7-229ENST00000549883 ASB4Q9Y574 426 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms