RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ZNF763Q0D2J5 394 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 SRSF6Q13247 344 aaKnown RBP19.86■□□□□ 0.77
CACNB3-210ENST00000548874 ERV3-1Q14264 604 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 FAM69BQ5VUD6 431 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 CGB2Q6NT52 195 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 LAPTM4BQ86VI4 370 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 PROSER1Q86XN7 944 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 FAM47BQ8NA70 645 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 FNDC5Q8NAU1 212 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 TMEM52Q8NDY8 209 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 ACTRT2Q8TDY3 377 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 C16orf78Q8WTQ4 265 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 STON2Q8WXE9 905 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 SIKE1Q9BRV8 207 aa19.86■□□□□ 0.77
CACNB3-210ENST00000548874 SOX17Q9H6I2 414 aaPredicted RBP19.86■□□□□ 0.77
CACNB3-210ENST00000548874 PTRH2Q9Y3E5 179 aaKnown RBP19.86■□□□□ 0.77
CACNB3-210ENST00000548874 GOLGA8QA0A0J9YX86 632 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 BLACEA4D250 179 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 GOLGA8OA6NCC3 632 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 GOLGA8NF8WBI6 632 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 TAF4O00268 1085 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 KLK10O43240 276 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 DIAPH2O60879 1101 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 GUCY1B2O75343 617 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 AIFM1O95831 613 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 RECKO95980 971 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 CYC1P08574 325 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 BCKDHAP12694 445 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 TACR1P25103 407 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 MAPK1P28482 360 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 BUD31P41223 144 aaPredicted RBP19.85■□□□□ 0.77
CACNB3-210ENST00000548874 FOLR3P41439 243 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 IDH3AP50213 366 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 AQP5P55064 265 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 ERVK-8P63133 956 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 RHAGQ02094 409 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 MAD2L1Q13257 205 aaPredicted RBP19.85■□□□□ 0.77
CACNB3-210ENST00000548874 NDUFAF5Q5TEU4 345 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 C18orf63Q68DL7 685 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 SHISA6Q6ZSJ9 500 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 SCUBE1Q8IWY4 988 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 ZNF595Q8IYB9 648 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 PRSS58Q8IYP2 241 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 ZCCHC14Q8WYQ9 949 aaKnown RBP19.85■□□□□ 0.77
CACNB3-210ENST00000548874 CHMP6Q96FZ7 201 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 SLC45A3Q96JT2 553 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 OR52B2Q96RD2 323 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 C1orf50Q9BV19 199 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 TRIM55Q9BYV6 548 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 VN1R1Q9GZP7 353 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 NPHS2Q9NP85 383 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 MYNNQ9NPC7 610 aa19.85■□□□□ 0.77
CACNB3-210ENST00000548874 MRPS33Q9Y291 106 aaKnown RBP19.85■□□□□ 0.77
CACNB3-210ENST00000548874 WBP11Q9Y2W2 641 aaKnown RBP19.85■□□□□ 0.77
CACNB3-210ENST00000548874 MRPS18BQ9Y676 258 aaKnown RBP19.85■□□□□ 0.77
CACNB3-210ENST00000548874 IDSB3KWA1 339 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 B4GALT2O60909 372 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 CDC123O75794 336 aaPredicted RBP19.84■□□□□ 0.77
CACNB3-210ENST00000548874 NR2F6P10588 404 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 TLX1P31314 330 aaPredicted RBP19.84■□□□□ 0.77
CACNB3-210ENST00000548874 TAS2R50P59544 299 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 GNGT1P63211 74 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 IL23RQ5VWK5 629 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 QSOX2Q6ZRP7 698 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 SPACA3Q8IXA5 215 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 PARP9Q8IXQ6 854 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 KDF1Q8NAX2 398 aaPredicted RBP19.84■□□□□ 0.77
CACNB3-210ENST00000548874 PLPP5Q8NEB5 264 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 RFWD2Q8NHY2 731 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 EBF4Q9BQW3 602 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 CRB3Q9BUF7 120 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 RPF2Q9H7B2 306 aaKnown RBP19.84■□□□□ 0.77
CACNB3-210ENST00000548874 KCNK13Q9HB14 408 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 PRDM9Q9NQV7 894 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 NOP53Q9NZM5 478 aaKnown RBP19.84■□□□□ 0.77
CACNB3-210ENST00000548874 MKL2Q9ULH7 1088 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 RAXQ9Y2V3 346 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 MMACHCQ9Y4U1 282 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 PCDHA9Q9Y5H5 950 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 CLDN16Q9Y5I7 305 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 FREM2Q5SZK8 3169 aa19.84■□□□□ 0.77
CACNB3-210ENST00000548874 IGKV3D-11A0A0A0MRZ8 115 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 OR2W5A6NFC9 320 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 PRKRAO75569 313 aaKnown RBP19.83■□□□□ 0.77
CACNB3-210ENST00000548874 CREG1O75629 220 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 IL3P08700 152 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 TROVE2P10155 538 aaKnown RBP eCLIP19.83■□□□□ 0.77
CACNB3-210ENST00000548874 PRPS2P11908 318 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 WT1P19544 449 aaPredicted RBP19.83■□□□□ 0.77
CACNB3-210ENST00000548874 HSD17B7P56937 341 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 BTG2P78543 158 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 MINDY4Q4G0A6 757 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 FAM71E1Q6IPT2 247 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 RIPOR1Q6ZS17 1223 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 IKBIPQ70UQ0 350 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 CLNKQ7Z7G1 428 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 CEP70Q8NHQ1 597 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 STARD8Q92502 1023 aa19.83■□□□□ 0.77
CACNB3-210ENST00000548874 THOC1Q96FV9 657 aaKnown RBP19.83■□□□□ 0.77
CACNB3-210ENST00000548874 EGLN2Q96KS0 407 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms