RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 MRPL43Q8N983 215 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 CHTF18Q8WVB6 975 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 BADQ92934 168 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 TMEM19Q96HH6 336 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 MRGPRX3Q96LB0 322 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 FCRL4Q96PJ5 515 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 BBS4Q96RK4 519 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 TMEM245Q9H330 911 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 ZCCHC3Q9NUD5 404 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 EHD3Q9NZN3 535 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 NDRG4Q9ULP0 352 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 GPR52Q9Y2T5 361 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 SLC35F4A4IF30 521 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 PRAMEF25A6NGN4 478 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 H0YIV9 168 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 CDC42P60953 191 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 GPAT3Q53EU6 434 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 SPATC1Q76KD6 591 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 APH1BQ8WW43 257 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 ART5Q96L15 291 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 WFDC6Q9BQY6 131 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 SNTG1Q9NSN8 517 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 PMF1-BGLAPU3KQ54 211 aa13.04□□□□□ -0.32
PRPF40B-209ENST00000548825 MOSPD3O75425 235 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 FGBP02675 491 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 FURINP09958 794 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 SLC35G4P0C7Q5 338 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 ADRB3P13945 408 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 JUNBP17275 347 aaPredicted RBP13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 TEAD4Q15561 434 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 PROX2Q3B8N5 592 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 PAQR6Q6TCH4 344 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 ANKRD33Q7Z3H0 272 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 CCDC116Q8IYX3 515 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 DNAJB8Q8NHS0 232 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 MYDGFQ969H8 173 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 DTD2Q96FN9 168 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 DSN1Q9H410 356 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 NMNAT1Q9HAN9 279 aaPredicted RBP13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 CLEC2DQ9UHP7 191 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 HEPACAM2A8MVW5 462 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 ANHXE9PGG2 379 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 PRNPP04156 253 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 GABARAPL2P60520 117 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 MAP4K2Q12851 820 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 ZNF234Q14588 700 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 TYW3Q6IPR3 259 aaKnown RBP13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 LILRA6Q6PI73 481 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 DHRS4L2Q6PKH6 230 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 TMEM145Q8NBT3 493 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 KAT2AQ92830 837 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 RAD51AP1Q96B01 352 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 RSPRY1Q96DX4 576 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 EFCAB11Q9BUY7 163 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 CEP44Q9C0F1 390 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 DUSP21Q9H596 190 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 SLAMF7Q9NQ25 335 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 PAK6Q9NQU5 681 aaPredicted RBP13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 ASIC5Q9NY37 505 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 MALT1Q9UDY8 824 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 GBF1Q92538 1859 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 A0A1W2PS29 197 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 TRIM64A6NGJ6 449 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 CTDSP2O14595 271 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 SLC16A5O15375 505 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 TLX2O43763 284 aaPredicted RBP13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 ITGAMP11215 1152 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 ATP6V1E1P36543 226 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 MAGEA2P43356 314 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 ID2Q02363 134 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 TECPR1Q7Z6L1 1165 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 KRT78Q8N1N4 520 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 DTX3Q8N9I9 347 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 OR56A3Q8NH54 315 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 RELTQ969Z4 430 aa13.03□□□□□ -0.32
PRPF40B-209ENST00000548825 A0A1W2PP55 124 aa13.02□□□□□ -0.32
PRPF40B-209ENST00000548825 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.02□□□□□ -0.32
PRPF40B-209ENST00000548825 PTPN5P54829 565 aa13.02□□□□□ -0.32
PRPF40B-209ENST00000548825 CASP12Q6UXS9 341 aa13.02□□□□□ -0.32
PRPF40B-209ENST00000548825 B3GLCTQ6Y288 498 aa13.02□□□□□ -0.32
PRPF40B-209ENST00000548825 NEK10Q6ZWH5 1172 aa13.02□□□□□ -0.32
PRPF40B-209ENST00000548825 CAMKK1Q8N5S9 505 aa13.02□□□□□ -0.32
PRPF40B-209ENST00000548825 OR8K5Q8NH50 307 aa13.02□□□□□ -0.32
PRPF40B-209ENST00000548825 ABCB9Q9NP78 766 aa13.02□□□□□ -0.32
PRPF40B-209ENST00000548825 TAAR2Q9P1P5 351 aa13.02□□□□□ -0.32
PRPF40B-209ENST00000548825 PLPP1O14494 284 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 AP2A2O94973 939 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 GABARAPO95166 117 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 EIF2S1P05198 315 aaKnown RBP13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 INHBBP09529 407 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 SMU1Q2TAY7 513 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 ZNF404Q494X3 552 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 RRM2BQ7LG56 351 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 PRSS48Q7RTY5 328 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 C6orf120Q7Z4R8 191 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 ZNF614Q8N883 585 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 SLC38A5Q8WUX1 472 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 STARD8Q92502 1023 aa13.02□□□□□ -0.33
PRPF40B-209ENST00000548825 WDR12Q9GZL7 423 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms