RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 PIGAP37287 484 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 LIM2P55344 173 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 HSD17B7P56937 341 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 PPP2R2AP63151 447 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 SLC10A1Q14973 349 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 TRMT10BQ6PF06 316 aaKnown RBP11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 TMIGD1Q6UXZ0 262 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 RTL4Q6ZR62 310 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 GK5Q6ZS86 529 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 FRA10AC1Q70Z53 315 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 TRILQ7L0X0 811 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 TGIF2LYQ8IUE0 185 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 KLHL7Q8IXQ5 586 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 TMEM132CQ8N3T6 1108 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 PTPMT1Q8WUK0 201 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 ESAMQ96AP7 390 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 FAM173AQ9BQD7 235 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 NAT9Q9BTE0 207 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 ZDHHC11Q9H8X9 412 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 IL1RL2Q9HB29 575 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 ZNF358Q9NW07 568 aa11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 TUBA8Q9NY65 449 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 MRPS33Q9Y291 106 aaKnown RBP11.07□□□□□ -0.64
TRAFD1-205ENST00000548277 ZNF469Q96JG9 3925 aaPredicted RBP11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 LRIT2A6NDA9 550 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 FIGNL2A6NMB9 653 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 C17orf105B2RV13 164 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 BCKDKO14874 412 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 CTNSO60931 367 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 CTAG2O75638 210 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 CCL3P10147 92 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 UQCRC1P31930 480 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 ELK3P41970 407 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 GNG11P61952 73 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 RNF4P78317 190 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 FOLH1Q04609 750 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 TERF2Q15554 542 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 ELAVL1Q15717 326 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 PPP1R3AQ16821 1122 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 KRTAP21-3Q3LHN1 58 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 C1orf185Q5T7R7 199 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 WLSQ5T9L3 541 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 NDUFAF5Q5TEU4 345 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 TRIM40Q6P9F5 258 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 SLCO4C1Q6ZQN7 724 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 RGS9BPQ6ZS82 235 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 Q71RC1 249 aaPredicted RBP11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 ANKMY2Q8IV38 441 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 CNTN4Q8IWV2 1026 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 OR4N5Q8IXE1 308 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 ZNF595Q8IYB9 648 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 PDIK1LQ8N165 341 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 FAM109AQ8N4B1 249 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 SPATA6LQ8N4H0 392 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 DAZLQ92904 295 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 QRFPRQ96P65 431 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 F2RL3Q96RI0 385 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 NPLQ9BXD5 320 aaPredicted RBP11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 REXO4Q9GZR2 422 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 COPS7BQ9H9Q2 264 aaPredicted RBP11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 PLAC1Q9HBJ0 212 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 SACM1LQ9NTJ5 587 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 CTNNAL1Q9UBT7 734 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 ST6GALNAC2Q9UJ37 374 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 PPIEQ9UNP9 301 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 L3MBTL1Q9Y468 752 aa11.06□□□□□ -0.64
TRAFD1-205ENST00000548277 TRGV5A0A0B4J1U4 118 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 CYR61O00622 381 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 GLSO94925 669 aaPredicted RBP11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 LRATO95237 230 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 IGHG3P01860 377 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 GNAZP19086 355 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 KIR2DL3P43628 341 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 TRPC1P48995 793 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 MTTPP55157 894 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 WNT3P56703 355 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 ASPHQ12797 758 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 MORF4L2Q15014 288 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 TSNQ15631 228 aaKnown RBP11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 PRAMEF20Q5VT98 475 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 VN1R5Q7Z5H4 357 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 CREG2Q8IUH2 290 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 GPALPP1Q8IXQ4 340 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 KRT78Q8N1N4 520 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 NKAPQ8N5F7 415 aaKnown RBP11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 SNX31Q8N9S9 440 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 MORN4Q8NDC4 146 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 CHDHQ8NE62 594 aaPredicted RBP11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 OR2L5Q8NG80 312 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 SLC2A12Q8TD20 617 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 ANKRD49Q8WVL7 239 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 MED12Q93074 2177 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 PPWD1Q96BP3 646 aaKnown RBP11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 PDLIM5Q96HC4 596 aaKnown RBP11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 JSRP1Q96MG2 331 aaPredicted RBP11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 SERINC2Q96SA4 455 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 FOXC2Q99958 501 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 CLEC4MQ9H2X3 399 aaPredicted RBP11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 CRIM1Q9NZV1 1036 aa11.05□□□□□ -0.64
TRAFD1-205ENST00000548277 SPRR3Q9UBC9 169 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms