RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 SULF2Q8IWU5 870 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ZNF595Q8IYB9 648 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ZNF808Q8N4W9 903 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-211ENST00000547950 APCDD1LQ8NCL9 501 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 B3GNT7Q8NFL0 401 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 STAG3L4Q8TBR4 150 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ADAMTS18Q8TE60 1221 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 NCLNQ969V3 563 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 UBXN10Q96LJ8 280 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 FRMD6Q96NE9 622 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 QRFPRQ96P65 431 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 SERINC2Q96SA4 455 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 CSF3RQ99062 836 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 CCDC77Q9BR77 488 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ALOXE3Q9BYJ1 711 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 CD244Q9BZW8 370 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 PITHD1Q9GZP4 211 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-211ENST00000547950 RAB17Q9H0T7 212 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 EHD1Q9H4M9 534 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 NMRAL1Q9HBL8 299 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 PRDM7Q9NQW5 492 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 KCMF1Q9P0J7 381 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 DAPP1Q9UN19 280 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ERVK-11Q9UQG0 969 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ENTPD4Q9Y227 616 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 MRPS33Q9Y291 106 aaKnown RBP6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ACOT9Q9Y305 439 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 MMACHCQ9Y4U1 282 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 ASB1Q9Y576 335 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.25□□□□□ -1.41
SCAF11-211ENST00000547950 CLCA3PQ9Y6N3 262 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 SNRNP200O75643 2136 aaKnown RBP6.25□□□□□ -1.41
SCAF11-211ENST00000547950 CCDC88CQ9P219 2028 aa6.25□□□□□ -1.41
SCAF11-211ENST00000547950 DOPEY1Q5JWR5 2465 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 ESYT3A0FGR9 886 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 UBXN8O00124 270 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 WWP2O00308 870 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 SAP18O00422 153 aaKnown RBP6.24□□□□□ -1.41
SCAF11-211ENST00000547950 RTCAO00442 366 aaKnown RBP6.24□□□□□ -1.41
SCAF11-211ENST00000547950 CDK2AP1O14519 115 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 PRRG2O14669 202 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 PRKNO60260 465 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-211ENST00000547950 CDC40O60508 579 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCAF11-211ENST00000547950 LDB3O75112 727 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 OR2J2O76002 312 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 IL2RAP01589 272 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 C1QAP02745 245 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 LTA4HP09960 611 aaKnown RBP6.24□□□□□ -1.41
SCAF11-211ENST00000547950 SLC35E2BP0CK96 405 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 ZNF24P17028 368 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 EPORP19235 508 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 ATP5A1P25705 553 aaKnown RBP6.24□□□□□ -1.41
SCAF11-211ENST00000547950 CRABP2P29373 138 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 STX2P32856 288 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 PTGER1P34995 402 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 MEOX1P50221 254 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 SSR4P51571 173 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 GPR143P51810 404 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 SMSP52788 366 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 SLAMF1Q13291 335 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 DDX39BQ13838 428 aaKnown RBP6.24□□□□□ -1.41
SCAF11-211ENST00000547950 EFTUD2Q15029 972 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCAF11-211ENST00000547950 ZKSCAN8Q15776 578 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-211ENST00000547950 UAP1Q16222 522 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-211ENST00000547950 AP5B1Q2VPB7 878 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 ADPRMQ3LIE5 342 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 TMEM35AQ53FP2 167 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 MED27Q6P2C8 311 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 XKRXQ6PP77 449 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 ZDHHC24Q6UX98 284 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 IL20RBQ6UXL0 311 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 RPTNQ6XPR3 784 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 NCCRP1Q6ZVX7 275 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-211ENST00000547950 CHSY3Q70JA7 882 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 LRRC70Q7Z2Q7 622 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 DOLPP1Q86YN1 238 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 MYLK4Q86YV6 388 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-211ENST00000547950 SIAH3Q8IW03 269 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 SCUBE1Q8IWY4 988 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 MCEMP1Q8IX19 187 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 OR4N5Q8IXE1 308 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 CYP4Z2PQ8N1L4 340 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 GHDCQ8N2G8 530 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 TMEM132CQ8N3T6 1108 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 TEX9Q8N6V9 391 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 ZNF321PQ8N8H1 164 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 ACOT4Q8N9L9 421 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 PDPRQ8NCN5 879 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 ZNF473Q8WTR7 871 aaKnown RBP6.24□□□□□ -1.41
SCAF11-211ENST00000547950 KCTD4Q8WVF5 259 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 UBE2E3Q969T4 207 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 NXNL1Q96CM4 212 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 WDR34Q96EX3 536 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 VMP1Q96GC9 406 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 SEC16BQ96JE7 1060 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 KCNC2Q96PR1 638 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 MAPKAP1Q9BPZ7 522 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 LRRC1Q9BTT6 524 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 EFCAB11Q9BUY7 163 aa6.24□□□□□ -1.41
SCAF11-211ENST00000547950 SORBS1Q9BX66 1292 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms