RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 GHDCQ8N2G8 530 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 RNF175Q8N4F7 328 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 ACOT4Q8N9L9 421 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 OR7G3Q8NG95 312 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 C16orf52Q8NHV5 167 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 AGAP11Q8TF27 550 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 ANKRD9Q96BM1 317 aaPredicted RBP12.41□□□□□ -0.42
CPSF6-204ENST00000547486 KCNC2Q96PR1 638 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 TBCDQ9BTW9 1192 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 SORBS1Q9BX66 1292 aaKnown RBP12.41□□□□□ -0.42
CPSF6-204ENST00000547486 MS4A8Q9BY19 250 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 PHACTR1Q9C0D0 580 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 COPS7BQ9H9Q2 264 aaPredicted RBP12.41□□□□□ -0.42
CPSF6-204ENST00000547486 NMRAL1Q9HBL8 299 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 LYRM4Q9HD34 91 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 DEPPQ9NTK1 212 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 NUDT4Q9NZJ9 180 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 MYOTQ9UBF9 498 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 MRPS33Q9Y291 106 aaKnown RBP12.41□□□□□ -0.42
CPSF6-204ENST00000547486 KLF13Q9Y2Y9 288 aaPredicted RBP12.41□□□□□ -0.42
CPSF6-204ENST00000547486 YARS2Q9Y2Z4 477 aaKnown RBP12.41□□□□□ -0.42
CPSF6-204ENST00000547486 CLCA3PQ9Y6N3 262 aa12.41□□□□□ -0.42
CPSF6-204ENST00000547486 A0A1B0GTH9 108 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 PINLYPA6NC86 204 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 SUPT3HB4E1H0 165 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 KLRC4-KLRK1H3BQV0 150 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 C19orf84I3L1E1 186 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 K7EPI3 171 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 WWP2O00308 870 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 HS6ST1O60243 411 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 ZNF354AO60765 605 aaPredicted RBP12.4□□□□□ -0.42
CPSF6-204ENST00000547486 KERAO60938 352 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 SUPT3HO75486 399 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 OR6B1O95007 311 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 ETHE1O95571 254 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 LTA4HP09960 611 aaKnown RBP12.4□□□□□ -0.42
CPSF6-204ENST00000547486 PCNAP12004 261 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 ABOP16442 354 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 AGAP20933 346 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 HIST1H1TP22492 207 aaPredicted RBP12.4□□□□□ -0.42
CPSF6-204ENST00000547486 CRABP2P29373 138 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 HPDP32754 393 aaPredicted RBP12.4□□□□□ -0.42
CPSF6-204ENST00000547486 STX2P32856 288 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 SSR4P51571 173 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 TGM3Q08188 693 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 TMEM35AQ53FP2 167 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 CMPK2Q5EBM0 449 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 MROH9Q5TGP6 573 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 MED27Q6P2C8 311 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 ZNF572Q7Z3I7 529 aaPredicted RBP12.4□□□□□ -0.42
CPSF6-204ENST00000547486 TBC1D1Q86TI0 1168 aaPredicted RBP12.4□□□□□ -0.42
CPSF6-204ENST00000547486 CENPLQ8N0S6 344 aaPredicted RBP12.4□□□□□ -0.42
CPSF6-204ENST00000547486 TMEM132CQ8N3T6 1108 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 ZFP62Q8NB50 900 aaPredicted RBP12.4□□□□□ -0.42
CPSF6-204ENST00000547486 POGLUT1Q8NBL1 392 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 OR52N2Q8NGI0 321 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 UBTD2Q8WUN7 234 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 KCTD4Q8WVF5 259 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 MRRFQ96E11 262 aaKnown RBP12.4□□□□□ -0.42
CPSF6-204ENST00000547486 DMRTA2Q96SC8 542 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 CCDC77Q9BR77 488 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 RAB17Q9H0T7 212 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 OR51B5Q9H339 312 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 ACOT9Q9Y305 439 aa12.4□□□□□ -0.42
CPSF6-204ENST00000547486 CREBBPQ92793 2442 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 LRRC14BA6NHZ5 514 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 PDE9AO76083 593 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 SCELO95171 688 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 C2P06681 752 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 TNNI3P19429 210 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 KIR3DL1P43629 444 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 SMSP52788 366 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 HK2P52789 917 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 STX4Q12846 297 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 SLAMF1Q13291 335 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 ZNF750Q32MQ0 723 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 DEPDC1Q5TB30 811 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 KHDRBS2Q5VWX1 349 aaKnown RBP12.39□□□□□ -0.43
CPSF6-204ENST00000547486 IL20RBQ6UXL0 311 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 HSDL2Q6YN16 418 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 DGAT2L6Q6ZPD8 337 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 CHSY3Q70JA7 882 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 OR4N5Q8IXE1 308 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 TEX9Q8N6V9 391 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 MORN4Q8NDC4 146 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 SRFBP1Q8NEF9 429 aaKnown RBP12.39□□□□□ -0.43
CPSF6-204ENST00000547486 HUS1BQ8NHY5 278 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 GPR78Q96P69 363 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 RASL10BQ96S79 203 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 LRRC1Q9BTT6 524 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 OR8D2Q9GZM6 311 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 ROGDIQ9GZN7 287 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 CHST11Q9NPF2 352 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 TIMMDC1Q9NPL8 285 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 ZDHHC18Q9NUE0 388 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 OPTCQ9UBM4 332 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 ERVK-11Q9UQG0 969 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 CSMD1Q96PZ7 3565 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 MYO9AB2RTY4 2548 aa12.39□□□□□ -0.43
CPSF6-204ENST00000547486 A0A0G2JMM0 328 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms