RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 MRPL38Q96DV4 380 aaKnown RBP12.11□□□□□ -0.47
SCAF11-209ENST00000547018 COX14Q96I36 57 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 IL4I1Q96RQ9 567 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 TCEAL2Q9H3H9 227 aaPredicted RBP12.11□□□□□ -0.47
SCAF11-209ENST00000547018 WDR70Q9NW82 654 aa12.11□□□□□ -0.47
SCAF11-209ENST00000547018 C17orf113A0A1B0GUU1 675 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 TBX6O95947 436 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 IGFBP1P08833 259 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 TFPTP0C1Z6 253 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 BCL6P41182 706 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 BUD31P41223 144 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 KIR2DL1P43626 348 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 RAB28P51157 221 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 DSTNP60981 165 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 LSAMPQ13449 338 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 GPR19Q15760 415 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 DEFB134Q4QY38 66 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 BROXQ5VW32 411 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 FAM71E1Q6IPT2 247 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 TMEM92Q6UXU6 159 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 ADAMTSL4Q6UY14 1074 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 EIF3MQ7L2H7 374 aaKnown RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 RTL10Q7L3V2 364 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 C6orf120Q7Z4R8 191 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 P3H2Q8IVL5 708 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 GOLM1Q8NBJ4 401 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 TM4SF18Q96CE8 201 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 SLC6A14Q9UN76 642 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 CYP8B1Q9UNU6 501 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 GCM2O75603 506 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 ADH1BP00325 375 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 DNAJA1P31689 397 aaKnown RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 CCT3P49368 545 aaKnown RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 RPP38P78345 283 aaKnown RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 SRSF5Q13243 272 aaKnown RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 DEFB110Q30KQ9 67 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 SPATS1Q496A3 300 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 TOR1AIP1Q5JTV8 583 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 KLHDC8AQ8IYD2 350 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 LGI4Q8N135 537 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 OR2A1Q8NGT9 310 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.1□□□□□ -0.479e-7■□□□□ 10.4
SCAF11-209ENST00000547018 PHF10Q8WUB8 498 aaKnown RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 SRMSQ9H3Y6 488 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 EPHX3Q9H6B9 360 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 SYNPO2LQ9H987 977 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 C11orf16Q9NQ32 467 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 NFKBIL1Q9UBC1 381 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 ATG4BQ9Y4P1 393 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 H3BN98 237 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 CAPN5O15484 640 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 HSD3B1P14060 373 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 HSD3B2P26439 372 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 MAOBP27338 520 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 HEPACAMQ14CZ8 416 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 GPAT3Q53EU6 434 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 TMEM107Q6UX40 140 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 UNC5DQ6UXZ4 953 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 CBLL1Q75N03 491 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 PIWIL3Q7Z3Z3 882 aaKnown RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 APLFQ8IW19 511 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 RELTQ969Z4 430 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 RGMAQ96B86 450 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 C16orf58Q96GQ5 468 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 TMEM19Q96HH6 336 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 NODALQ96S42 347 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 WFDC6Q9BQY6 131 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 DOHHQ9BU89 302 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 MS4A8Q9BY19 250 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 RBM38Q9H0Z9 239 aaKnown RBP12.1□□□□□ -0.47
SCAF11-209ENST00000547018 NCKAP1Q9Y2A7 1128 aa12.1□□□□□ -0.47
SCAF11-209ENST00000547018 IGKV1-8A0A0C4DH67 115 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 C1orf226A1L170 272 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 PRMT3O60678 531 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 KLHL18O94889 574 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 NTN1O95631 604 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 CRHBPP24387 322 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 CLK3P49761 638 aaKnown RBP12.09□□□□□ -0.47
SCAF11-209ENST00000547018 RPE65Q16518 533 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 ERICH5Q6P6B1 374 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 ZNF793Q6ZN11 406 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 ZNF765Q7L2R6 523 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 NUDT13Q86X67 352 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 LAS2Q8IYD9 372 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 SVOPLQ8N434 492 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 OR10G2Q8NGC3 310 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 HCAR2Q8TDS4 363 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 STARD8Q92502 1023 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 PROX1Q92786 737 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 MAGEB10Q96LZ2 347 aaPredicted RBP12.09□□□□□ -0.47
SCAF11-209ENST00000547018 NIPSNAP1Q9BPW8 284 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 KLHL3Q9UH77 587 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 CELSR3Q9NYQ7 3312 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 A0A1W2PPV9 198 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 J3QRK9 145 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 M0R3H8 397 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 SLC1A7O00341 560 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 RNASET2O00584 256 aaKnown RBP12.09□□□□□ -0.47
SCAF11-209ENST00000547018 ZW10O43264 779 aa12.09□□□□□ -0.47
SCAF11-209ENST00000547018 PRPH2P23942 346 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms