RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 DNAJC15Q9Y5T4 150 aa13.6□□□□□ -0.23
DDX54-203ENST00000546869 SCN3AQ9NY46 2000 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 NSG1A0A0A6YYJ2 146 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 OR2W5A6NFC9 320 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 HMGB1P1B2RPK0 211 aaPredicted RBP13.59□□□□□ -0.23
DDX54-203ENST00000546869 MKRN2OSH3BPM6 223 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 TMPRSS11DO60235 418 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 GUCY1B2O75343 617 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 CRCPO75575 148 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 CDC123O75794 336 aaPredicted RBP13.59□□□□□ -0.23
DDX54-203ENST00000546869 RSL1D1O76021 490 aaKnown RBP13.59□□□□□ -0.23
DDX54-203ENST00000546869 CHEK2O96017 543 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 CHRNGP07510 517 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 ARRB2P32121 409 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 BUD31P41223 144 aaPredicted RBP13.59□□□□□ -0.23
DDX54-203ENST00000546869 GSTM5P46439 218 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 HTR6P50406 440 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 KCNAB2Q13303 367 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 TERF2Q15554 542 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 CHI3L2Q15782 390 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 CCNYL2Q5T2Q4 361 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 HHATQ5VTY9 493 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 TCTN3Q6NUS6 607 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 RIPOR1Q6ZS17 1223 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 ZCCHC23Q6ZST2 131 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 COMMD6Q7Z4G1 85 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 GALNT16Q8N428 558 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 GOLGA6L1Q8N7Z2 621 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 TMEM52Q8NDY8 209 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 PPP1R14CQ8TAE6 165 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 FAM76AQ8TAV0 307 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 ZBTB9Q96C00 473 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 C8orf44Q96CB5 159 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 WDR77Q9BQA1 342 aaPredicted RBP13.59□□□□□ -0.23
DDX54-203ENST00000546869 RBCK1Q9BYM8 510 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 TRIM55Q9BYV6 548 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 MCM8Q9UJA3 840 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 HAO1Q9UJM8 370 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 FBXW2Q9UKT8 454 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 ATG4BQ9Y4P1 393 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 PCSK5Q92824 1860 aa13.59□□□□□ -0.23
DDX54-203ENST00000546869 MGAQ8IWI9 3026 aa13.58□□□□□ -0.23
DDX54-203ENST00000546869 ARHGAP10A1A4S6 786 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 SLC28A1O00337 649 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 SASH3O75995 380 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 SERPINA7P05543 415 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 KLK1P06870 262 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 CHN1P15882 459 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 SERPINB3P29508 390 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 PPP2R1BP30154 601 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 CCL11P51671 97 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 HNRNPFP52597 415 aaKnown RBP13.58□□□□□ -0.24
DDX54-203ENST00000546869 HNRNPH2P55795 449 aaKnown RBP13.58□□□□□ -0.24
DDX54-203ENST00000546869 ABCE1P61221 599 aaKnown RBP13.58□□□□□ -0.24
DDX54-203ENST00000546869 IGLV3-21P80748 117 aaPredicted RBP13.58□□□□□ -0.24
DDX54-203ENST00000546869 TNFRSF17Q02223 184 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 SERTAD2Q14140 314 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 TTMPQ5BVD1 217 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 CPZQ66K79 652 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 PLAG1Q6DJT9 500 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 CLEC6AQ6EIG7 209 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 FAAH2Q6GMR7 532 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 JMJD6Q6NYC1 403 aaPredicted RBP13.58□□□□□ -0.24
DDX54-203ENST00000546869 ATG14Q6ZNE5 492 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 LANCL3Q6ZV70 420 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 HPS6Q86YV9 775 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 FAM47BQ8NA70 645 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 M1APQ8TC57 530 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 TSLPQ969D9 159 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 ABHD17AQ96GS6 310 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 CSF3RQ99062 836 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 HBEGFQ99075 208 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 LPAR4Q99677 370 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 MESP1Q9BRJ9 268 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 SHCBP1LQ9BZQ2 653 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 ACBD3Q9H3P7 528 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 RPF2Q9H7B2 306 aaKnown RBP13.58□□□□□ -0.24
DDX54-203ENST00000546869 NECTIN3Q9NQS3 549 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 VTI1BQ9UEU0 232 aa13.58□□□□□ -0.24
DDX54-203ENST00000546869 PPIEQ9UNP9 301 aaKnown RBP13.58□□□□□ -0.24
DDX54-203ENST00000546869 WBP11Q9Y2W2 641 aaKnown RBP13.58□□□□□ -0.24
DDX54-203ENST00000546869 CCDC88CQ9P219 2028 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 A0A1W2PR48 441 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 WDR91A4D1P6 747 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 RGS14O43566 566 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 DNAJB5O75953 348 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 FAM87AP0C7U9 286 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 NEFHP12036 1026 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 MAOAP21397 527 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 MAPK12P53778 367 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 OR4D2P58180 307 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 HMGCS1Q01581 520 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 ACSM2AQ08AH3 577 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 Q0VFX4 171 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 SLC13A2Q13183 592 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 STX3Q13277 289 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 MYBPC3Q14896 1274 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 KIAA0040Q15053 153 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 EXT1Q16394 746 aa13.57□□□□□ -0.24
DDX54-203ENST00000546869 SFT2D3Q587I9 215 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms