RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 C17orf58Q2M2W7 97 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 RFTN2Q52LD8 501 aaPredicted RBP2.84□□□□□ -1.95
CCDC38-204ENST00000546816 C2orf83Q53S99 150 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 DNAJB7Q7Z6W7 309 aaPredicted RBP2.84□□□□□ -1.95
CCDC38-204ENST00000546816 CCDC71Q8IV32 467 aaPredicted RBP2.84□□□□□ -1.95
CCDC38-204ENST00000546816 C4orf19Q8IY42 314 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 NME8Q8N427 588 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 KIF18AQ8NI77 898 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 SAP25Q8TEE9 199 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 HEXDCQ8WVB3 486 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 VPS33AQ96AX1 596 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 PPP1R16AQ96I34 528 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 MCCC1Q96RQ3 725 aaPredicted RBP2.84□□□□□ -1.95
CCDC38-204ENST00000546816 PRMT1Q99873 361 aaKnown RBP2.84□□□□□ -1.95
CCDC38-204ENST00000546816 DEFB126Q9BYW3 111 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 ZBP1Q9H171 429 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 NMUR1Q9HB89 426 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 SH3GLB2Q9NR46 395 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 CLIC5Q9NZA1 410 aa2.84□□□□□ -1.95
CCDC38-204ENST00000546816 NOCTQ9UK39 431 aaKnown RBP2.84□□□□□ -1.95
CCDC38-204ENST00000546816 ZSCAN5CA6NGD5 496 aaPredicted RBP2.83□□□□□ -1.96
CCDC38-204ENST00000546816 FAM86B1E9PN63 330 aa2.83□□□□□ -1.96
CCDC38-204ENST00000546816 FAM86B2P0C5J1 330 aa2.83□□□□□ -1.96
CCDC38-204ENST00000546816 SLC1A3P43003 542 aa2.83□□□□□ -1.96
CCDC38-204ENST00000546816 OR3A1P47881 315 aa2.83□□□□□ -1.96
CCDC38-204ENST00000546816 TMEM182Q6ZP80 229 aaPredicted RBP2.83□□□□□ -1.96
CCDC38-204ENST00000546816 C8orf46Q8TAG6 207 aa2.83□□□□□ -1.96
CCDC38-204ENST00000546816 ST6GALNAC6Q969X2 333 aa2.83□□□□□ -1.96
CCDC38-204ENST00000546816 BPIFA2Q96DR5 249 aa2.83□□□□□ -1.96
CCDC38-204ENST00000546816 FER1L6-AS2Q96M78 137 aa2.83□□□□□ -1.96
CCDC38-204ENST00000546816 INPP5KQ9BT40 448 aa2.83□□□□□ -1.96
CCDC38-204ENST00000546816 ZNF446Q9NWS9 450 aa2.83□□□□□ -1.96
CCDC38-204ENST00000546816 RSPH14Q9UHP6 348 aa2.83□□□□□ -1.96
CCDC38-204ENST00000546816 SH3GLB1Q9Y371 365 aa2.83□□□□□ -1.96
CCDC38-204ENST00000546816 TDRD6O60522 2096 aaKnown RBP2.83□□□□□ -1.96
CCDC38-204ENST00000546816 A0A0B4J203 849 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 HTR3EA5X5Y0 456 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 ZNF487B1APH4 448 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 ADRA2CP18825 462 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 MEOX2P50222 304 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 HMGCS2P54868 508 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 RPP38P78345 283 aaKnown RBP2.82□□□□□ -1.96
CCDC38-204ENST00000546816 GPR50Q13585 617 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 ARMCX4Q5H9R4 360 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 C1orf141Q5JVX7 400 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 SHEQ5VZ18 495 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 REP15Q6BDI9 236 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 TXNRD3NBQ6F5E7 133 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 IGFL3Q6UXB1 125 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 SLFN11Q7Z7L1 901 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 MEX3DQ86XN8 651 aaKnown RBP2.82□□□□□ -1.96
CCDC38-204ENST00000546816 CARNMT1Q8N4J0 409 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 TMEM99Q8N816 258 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 CLEC1AQ8NC01 280 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 OR13C5Q8NGS8 318 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 FERMT1Q9BQL6 677 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 CCM2Q9BSQ5 444 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 TRIM7Q9C029 511 aa2.82□□□□□ -1.96
CCDC38-204ENST00000546816 ZNF275Q9NSD4 429 aaPredicted RBP2.82□□□□□ -1.96
CCDC38-204ENST00000546816 NFKBIL1Q9UBC1 381 aaPredicted RBP2.82□□□□□ -1.96
CCDC38-204ENST00000546816 OR5H15A6NDH6 313 aa2.81□□□□□ -1.96
CCDC38-204ENST00000546816 EIF5BO60841 1220 aaKnown RBP2.81□□□□□ -1.96
CCDC38-204ENST00000546816 CALCAP01258 141 aa2.81□□□□□ -1.96
CCDC38-204ENST00000546816 TIA1P31483 386 aaKnown RBP eCLIP2.81□□□□□ -1.96
CCDC38-204ENST00000546816 BRCC3P46736 316 aa2.81□□□□□ -1.96
CCDC38-204ENST00000546816 TFCP2Q12800 502 aa2.81□□□□□ -1.96
CCDC38-204ENST00000546816 KCTD2Q14681 263 aa2.81□□□□□ -1.96
CCDC38-204ENST00000546816 ABRAXAS2Q15018 415 aa2.81□□□□□ -1.96
CCDC38-204ENST00000546816 LIPJQ5W064 366 aa2.81□□□□□ -1.96
CCDC38-204ENST00000546816 FAM91A1Q658Y4 838 aa2.81□□□□□ -1.96
CCDC38-204ENST00000546816 EDEM3Q9BZQ6 932 aa2.81□□□□□ -1.96
CCDC38-204ENST00000546816 UBE2TQ9NPD8 197 aaPredicted RBP2.81□□□□□ -1.96
CCDC38-204ENST00000546816 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.81□□□□□ -1.96
CCDC38-204ENST00000546816 VNN3Q9NY84 501 aa2.81□□□□□ -1.96
CCDC38-204ENST00000546816 CLEC4EQ9ULY5 219 aa2.81□□□□□ -1.96
CCDC38-204ENST00000546816 C5orf52A6NGY3 159 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 H7C0S8 307 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 LRRTM2O43300 516 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 SCO2O43819 266 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 RHBDL1O75783 438 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 VIMP08670 466 aaKnown RBP2.8□□□□□ -1.96
CCDC38-204ENST00000546816 SKILP12757 684 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 PDGFRAP16234 1089 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 TNFRSF4P43489 277 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 RGRP47804 291 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 ABRQ12979 859 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 CEACAM7Q14002 265 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 CRMP1Q14194 572 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 SPATA21Q7Z572 469 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 NLRP14Q86W24 1093 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 CACUL1Q86Y37 369 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 CREBRFQ8IUR6 639 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 ZNF525Q8N782 197 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 ZNF491Q8N8L2 437 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 SETD6Q8TBK2 473 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 GPR148Q8TDV2 347 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 RIT1Q92963 219 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 ZNF285Q96NJ3 590 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 SIGLEC12Q96PQ1 595 aa2.8□□□□□ -1.96
CCDC38-204ENST00000546816 CENPOQ9BU64 300 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms