RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 SLC35G6P0C7Q6 338 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 NR2C1P13056 603 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 PGAM2P15259 253 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 NRLP54845 237 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 TAF10Q12962 218 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 TDGQ13569 410 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 ELOAQ14241 798 aaKnown RBP12.32□□□□□ -0.44
PTCH1-212ENST00000546744 KLHL26Q53HC5 615 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 OR2T33Q8NG76 320 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 OR13C4Q8NGS5 318 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 GATAD2BQ8WXI9 593 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 GTF2H4Q92759 462 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 RGMAQ96B86 450 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 TMEM185BQ9H7F4 350 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 GLTPQ9NZD2 209 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 KCNN3Q9UGI6 736 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 LIPT1Q9Y234 373 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 PCDHGA8Q9Y5G5 932 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 TSTD3H0UI37 97 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 GNALP38405 381 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 RGS6P49758 472 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 NDUFV1P49821 464 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 ARFRP1Q13795 201 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 GRB7Q14451 532 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 ZMYND11Q15326 602 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 OR7G3Q8NG95 312 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF563Q8TA94 476 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 ELMOD3Q96FG2 381 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 ZBED3Q96IU2 234 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-212ENST00000546744 CNTNAP3BQ96NU0 1288 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 PEBP4Q96S96 227 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 MTERF1Q99551 399 aaKnown RBP12.32□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF416Q9BWM5 594 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF700Q9H0M5 742 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 SMOC2Q9H3U7 446 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 NMUR1Q9HB89 426 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 SLC43A1O75387 559 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 SPATA31D3P0C874 917 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 FNTBP49356 437 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 BLOC1S1P78537 153 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 PIGFQ07326 219 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 GXYLT1Q4G148 440 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 SMARCD3Q6STE5 483 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 SPATA31D4Q6ZUB0 917 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 LYSMD3Q7Z3D4 306 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 PIWIL3Q7Z3Z3 882 aaKnown RBP12.32□□□□□ -0.44
PTCH1-212ENST00000546744 PGBD3Q8N328 593 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 MAPK15Q8TD08 544 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 FEVQ99581 238 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 OR51I1Q9H343 314 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 STARD7Q9NQZ5 370 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 PHPT1Q9NRX4 125 aaPredicted RBP12.32□□□□□ -0.44
PTCH1-212ENST00000546744 DCAF13Q9NV06 445 aaKnown RBP12.32□□□□□ -0.44
PTCH1-212ENST00000546744 ACTR10Q9NZ32 417 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 TMEM98Q9Y2Y6 226 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 TMEM14AQ9Y6G1 99 aa12.32□□□□□ -0.44
PTCH1-212ENST00000546744 F8W036 122 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 J3QLW9 94 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 LCMT2O60294 686 aaKnown RBP12.31□□□□□ -0.44
PTCH1-212ENST00000546744 OPN1SWP03999 348 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 HTR1AP08908 422 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 OSMP13725 252 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF19P17023 458 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 FBXO48Q5FWF7 155 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 NOXRED1Q6NXP6 359 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 TMED4Q7Z7H5 227 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 CLDN22Q8N7P3 220 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 ANGPTL6Q8NI99 470 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 OR8D1Q8WZ84 308 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 OR51E2Q9H255 320 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 RBFOX1Q9NWB1 397 aaKnown RBP12.31□□□□□ -0.44
PTCH1-212ENST00000546744 CACNG2Q9Y698 323 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 ANKRD31Q8N7Z5 1873 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 WASH4PA8MWX3 477 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 A8MX80 341 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 CCL22O00626 93 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 PRAMEF2O60811 474 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 SMIM18P0DKX4 95 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 DGKZQ13574 1117 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 ARL6IP1Q15041 203 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 FNDC3BQ53EP0 1204 aaKnown RBP12.31□□□□□ -0.44
PTCH1-212ENST00000546744 CLEC20AQ6ZU45 233 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 NAT16Q8N8M0 369 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 COX18Q8N8Q8 333 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 SYT14Q8NB59 555 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 PROKR2Q8NFJ6 384 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 OR6K6Q8NGW6 343 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 CLEC4DQ8WXI8 215 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 OR5P2Q8WZ92 322 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 CDK15Q96Q40 435 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 EQTNQ9NQ60 294 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 FBXO8Q9NRD0 319 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 ENPP4Q9Y6X5 453 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 AGRPO00253 132 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 DIRAS1O95057 198 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 FUCA1P04066 466 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 BCHEP06276 602 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 BCKDHAP12694 445 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 RAB3AP20336 220 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 MTNR1AP48039 350 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms