RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 RPS9P46781 194 aaKnown RBP11.35□□□□□ -0.59
CCDC38-202ENST00000546386 RFX3P48380 749 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 NCBP2P52298 156 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCDC38-202ENST00000546386 HHEXQ03014 270 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 DMPKQ09013 629 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 BIRC2Q13490 618 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 DUSP7Q16829 419 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 LRIT3Q3SXY7 679 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 KIAA0895LQ68EN5 471 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 KLHDC7BQ96G42 594 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 PYURFQ96I23 114 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 REXO5Q96IC2 774 aaKnown RBP11.35□□□□□ -0.59
CCDC38-202ENST00000546386 FCRL1Q96LA6 429 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 GUCD1Q96NT3 240 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 OR2A14Q96R47 310 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 SH3GL1Q99961 368 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 ADI1Q9BV57 179 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 FAM117AQ9C073 453 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 USP36Q9P275 1121 aaKnown RBP11.35□□□□□ -0.59
CCDC38-202ENST00000546386 MUTYHQ9UIF7 546 aa11.35□□□□□ -0.59
CCDC38-202ENST00000546386 SPTY2D1-AS1A0A0U1RR47 76 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 PRAMEF25A6NGN4 478 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 PRAMEF26H0Y7S4 382 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 M0R129 80 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 TNFP01375 233 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 OR12D1P0DN82 309 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 VSX2P58304 361 aaPredicted RBP11.34□□□□□ -0.59
CCDC38-202ENST00000546386 ABHD18Q0P651 414 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 ARHGAP19Q14CB8 494 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 ATP6AP1Q15904 470 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 AVL9Q8NBF6 648 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 VANGL1Q8TAA9 524 aaPredicted RBP11.34□□□□□ -0.59
CCDC38-202ENST00000546386 FAM131CQ96AQ9 280 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 ZG16BQ96DA0 208 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 CNRIP1Q96F85 164 aaPredicted RBP11.34□□□□□ -0.59
CCDC38-202ENST00000546386 ZNF597Q96LX8 424 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 CCDC115Q96NT0 180 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 LRRC61Q9BV99 259 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 RUBCNLQ9H714 662 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 WASH6PQ9NQA3 447 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 IRAK4Q9NWZ3 460 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 DOLKQ9UPQ8 538 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 PRR19A6NJB7 356 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 PRICKLE3O43900 615 aaPredicted RBP11.34□□□□□ -0.59
CCDC38-202ENST00000546386 MAN1A2O60476 641 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 GPR37L1O60883 481 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 HSD3B1P14060 373 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 IL7RP16871 459 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 GPX2P18283 190 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 DDCP20711 480 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 HSD3B2P26439 372 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 HNRNPFP52597 415 aaKnown RBP11.34□□□□□ -0.59
CCDC38-202ENST00000546386 PHEXP78562 749 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 LSM11P83369 360 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC38-202ENST00000546386 HOXC5Q00444 222 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 MERTKQ12866 999 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 KCNAB1Q14722 419 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 LASP1Q14847 261 aaKnown RBP11.34□□□□□ -0.59
CCDC38-202ENST00000546386 COL19A1Q14993 1142 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 SYPL1Q16563 259 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 SYT16Q17RD7 645 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 SMU1Q2TAY7 513 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 AMZ1Q400G9 498 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 FBXO43Q4G163 708 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 PPP4R4Q6NUP7 873 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 ZC3H14Q6PJT7 736 aaKnown RBP11.34□□□□□ -0.59
CCDC38-202ENST00000546386 ABRAXAS1Q6UWZ7 409 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 USP53Q70EK8 1073 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 ZBTB46Q86UZ6 589 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 TRIM69Q86WT6 500 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 NUDT13Q86X67 352 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 ZDHHC13Q8IUH4 622 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 NLGN4XQ8N0W4 816 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 ANKFN1Q8N957 763 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 OR9A2Q8NGT5 310 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 BDH2Q9BUT1 245 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 GORASP2Q9H8Y8 452 aa11.34□□□□□ -0.59
CCDC38-202ENST00000546386 DNMT3AQ9Y6K1 912 aaPredicted RBP11.34□□□□□ -0.59
CCDC38-202ENST00000546386 A0A1W2PPC4 97 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 A8MU76 341 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 FRS3O43559 492 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 AIFM1O95831 613 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 CMPK1P30085 196 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 ARSFP54793 590 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 E2F2Q14209 437 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 SLC9A5Q14940 896 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 SYT13Q7L8C5 426 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 METTL25Q8N6Q8 603 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 DNASE1L2Q92874 299 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 RHNO1Q9BSD3 238 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 TOR3AQ9H497 397 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 GLIPR2Q9H4G4 154 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 MYNNQ9NPC7 610 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 CD320Q9NPF0 282 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 PRDM7Q9NQW5 492 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 ACTR10Q9NZ32 417 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 SCML1Q9UN30 329 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 PCDHGA4Q9Y5G9 962 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 A6NCN8 305 aa11.33□□□□□ -0.6
CCDC38-202ENST00000546386 TMEM229AB2RXF0 380 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms