RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TXLNGQ9NUQ3 528 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF225Q9UK10 706 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 TCFL5Q9UL49 500 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 PPT2Q9UMR5 302 aa6.01□□□□□ -1.45
PRKDC-211ENST00000546304 TMEM184BQ9Y519 407 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-211ENST00000546304 TEX51A0A1B0GUA7 166 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 HYKKA2RU49 373 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 ANKDD1BA6NHY2 528 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 TMEM233B4DJY2 109 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 C4orf51C9J302 202 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 DSCR3O14972 297 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 ERI3O43414 337 aaKnown RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 RAD1O60671 282 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 HSPA4LO95757 839 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 TBX6O95947 436 aaPredicted RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 KRT6AP02538 564 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 KRT6BP04259 564 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 NTRK1P04629 796 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 HBQ1P09105 142 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF888P0CJ79 500 aaPredicted RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 LIPCP11150 499 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 NEFHP12036 1026 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 CHN1P15882 459 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 IL1RNP18510 177 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 GRK2P25098 689 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 HNRNPH1P31943 449 aaKnown RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 ARRB2P32121 409 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 TRHRP34981 398 aaPredicted RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 PIK3CBP42338 1070 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 KRT6CP48668 564 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 HTR6P50406 440 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 ARSFP54793 590 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 FOXA1P55317 472 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 STXBP1P61764 594 aaKnown RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 SKP1P63208 163 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 GALNT1Q10472 559 aaPredicted RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 BST1Q10588 318 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 HERC3Q15034 1050 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 NDUFA9Q16795 377 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 ARL13AQ5H913 290 aaPredicted RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 TOR1AIP1Q5JTV8 583 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 SH2D4BQ5SQS7 431 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 ARHGAP40Q5TG30 622 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 C1orf189Q5VU69 101 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 CES4AQ5XG92 561 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 KANK2Q63ZY3 851 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 TTC19Q6DKK2 380 aaPredicted RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 FAM198BQ6UWH4 519 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 UNQ6494/PRO21346Q6UXR6 183 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 TTLL10Q6ZVT0 673 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 ABHD13Q7L211 337 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 PRSS41Q7RTY9 318 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 ZFAND4Q86XD8 727 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 NLGN4XQ8N0W4 816 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 RNF175Q8N4F7 328 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 ESX1Q8N693 406 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 METTL27Q8N6F8 245 aaPredicted RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 SLC38A9Q8NBW4 561 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 NLGN4YQ8NFZ3 816 aaPredicted RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 RAB3IL1Q8TBN0 382 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 WDR20Q8TBZ3 569 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 AGR3Q8TD06 166 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 CREB3L4Q8TEY5 395 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF473Q8WTR7 871 aaKnown RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 DYDC1Q8WWB3 177 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 CLIP3Q96DZ5 547 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 TM4SF19Q96DZ7 209 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 MVB12AQ96EY5 273 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 CNDP1Q96KN2 507 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 LRFN5Q96NI6 719 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 GBP5Q96PP8 586 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 HBEGFQ99075 208 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 MTERF1Q99551 399 aaKnown RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 MACROD1Q9BQ69 325 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 CENPKQ9BS16 269 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 MS4A8Q9BY19 250 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 SHCBP1LQ9BZQ2 653 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 AICDAQ9GZX7 198 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 EML4Q9HC35 981 aaKnown RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 TNFRSF12AQ9NP84 129 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 INTS9Q9NV88 658 aaKnown RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 DHCR7Q9UBM7 475 aaKnown RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 DKK4Q9UBT3 224 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 NDOR1Q9UHB4 597 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF490Q9ULM2 529 aaPredicted RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 SNX6Q9UNH7 406 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 MRPS2Q9Y399 296 aaKnown RBP6□□□□□ -1.45
PRKDC-211ENST00000546304 TSC22D4Q9Y3Q8 395 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 BOD1L1Q8NFC6 3051 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 SPTA1P02549 2419 aa6□□□□□ -1.45
PRKDC-211ENST00000546304 ZFYVE26Q68DK2 2539 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 A0A088AWK7 358 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 LRIT2A6NDA9 550 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 URADA6NGE7 173 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF860A6NHJ4 632 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 DBX1A6NMT0 343 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 MAGEB17A8MXT2 336 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 C9J4A7 227 aa5.99□□□□□ -1.45
PRKDC-211ENST00000546304 FOXE1O00358 373 aaPredicted RBP5.99□□□□□ -1.45
PRKDC-211ENST00000546304 MANBAO00462 879 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms