RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 AKAP14Q86UN6 197 aa15.07■□□□□ 0
LDLR-204ENST00000545707 KLHDC8AQ8IYD2 350 aa15.07■□□□□ 0
LDLR-204ENST00000545707 LAS2Q8IYD9 372 aa15.07■□□□□ 0
LDLR-204ENST00000545707 CELF5Q8N6W0 485 aaKnown RBP15.07■□□□□ 0
LDLR-204ENST00000545707 HORMAD2Q8N7B1 307 aa15.07■□□□□ 0
LDLR-204ENST00000545707 SLC5A11Q8WWX8 675 aa15.07■□□□□ 0
LDLR-204ENST00000545707 REPS1Q96D71 796 aa15.07■□□□□ 0
LDLR-204ENST00000545707 CXorf40BQ96DE9 158 aa15.07■□□□□ 0
LDLR-204ENST00000545707 NUAK2Q9H093 628 aa15.07■□□□□ 0
LDLR-204ENST00000545707 RC3H2Q9HBD1 1191 aaKnown RBP15.07■□□□□ 0
LDLR-204ENST00000545707 EHD3Q9NZN3 535 aa15.07■□□□□ 0
LDLR-204ENST00000545707 ZAR1LA6NP61 321 aa15.06■□□□□ 0
LDLR-204ENST00000545707 FOXE1O00358 373 aaPredicted RBP15.06■□□□□ 0
LDLR-204ENST00000545707 HAT1O14929 419 aa15.06■□□□□ 0
LDLR-204ENST00000545707 MED26O95402 600 aa15.06■□□□□ 0
LDLR-204ENST00000545707 MMP12P39900 470 aa15.06■□□□□ 0
LDLR-204ENST00000545707 HMGA2P52926 109 aa15.06■□□□□ 0
LDLR-204ENST00000545707 DSTNP60981 165 aa15.06■□□□□ 0
LDLR-204ENST00000545707 ZNF45Q02386 682 aa15.06■□□□□ 0
LDLR-204ENST00000545707 PRKCDQ05655 676 aa15.06■□□□□ 0
LDLR-204ENST00000545707 NFE2L1Q14494 772 aa15.06■□□□□ 0
LDLR-204ENST00000545707 LRIT3Q3SXY7 679 aa15.06■□□□□ 0
LDLR-204ENST00000545707 NXPE4Q6UWF7 544 aa15.06■□□□□ 0
LDLR-204ENST00000545707 OLIG3Q7RTU3 272 aa15.06■□□□□ 0
LDLR-204ENST00000545707 HMGN2P46Q86SG4 172 aa15.06■□□□□ 0
LDLR-204ENST00000545707 SDHCQ99643 169 aaPredicted RBP15.06■□□□□ 0
LDLR-204ENST00000545707 FAM83CQ9BQN1 747 aa15.06■□□□□ 0
LDLR-204ENST00000545707 CCDC59Q9P031 241 aaKnown RBP15.06■□□□□ 0
LDLR-204ENST00000545707 MAPRE3Q9UPY8 281 aa15.06■□□□□ 0
LDLR-204ENST00000545707 PCYT1BQ9Y5K3 369 aaPredicted RBP15.06■□□□□ 0
LDLR-204ENST00000545707 SNX11Q9Y5W9 270 aa15.06■□□□□ 0
LDLR-204ENST00000545707 ANKDD1BA6NHY2 528 aa15.06■□□□□ 0
LDLR-204ENST00000545707 PSMD11O00231 422 aa15.06■□□□□ 0
LDLR-204ENST00000545707 QSOX1O00391 747 aa15.06■□□□□ 0
LDLR-204ENST00000545707 FGF18O76093 207 aa15.06■□□□□ 0
LDLR-204ENST00000545707 CXCL14O95715 111 aa15.06■□□□□ 0
LDLR-204ENST00000545707 SOD1P00441 154 aa15.06■□□□□ 0
LDLR-204ENST00000545707 RHCEP18577 417 aa15.06■□□□□ 0
LDLR-204ENST00000545707 IRS1P35568 1242 aa15.06■□□□□ 0
LDLR-204ENST00000545707 MESP2Q0VG99 397 aa15.06■□□□□ 0
LDLR-204ENST00000545707 E2F2Q14209 437 aa15.06■□□□□ 0
LDLR-204ENST00000545707 EIF4HQ15056 248 aaKnown RBP15.06■□□□□ 0
LDLR-204ENST00000545707 SF3B4Q15427 424 aaKnown RBP eCLIP15.06■□□□□ 02e-7■■■□□ 18.3
LDLR-204ENST00000545707 PLAG1Q6DJT9 500 aa15.06■□□□□ 0
LDLR-204ENST00000545707 HIST2H2AA3Q6FI13 130 aa15.06■□□□□ 0
LDLR-204ENST00000545707 DPPA4Q7L190 304 aa15.06■□□□□ 0
LDLR-204ENST00000545707 OR9A1PQ8NGU1 263 aa15.06■□□□□ 0
LDLR-204ENST00000545707 SLC38A5Q8WUX1 472 aa15.06■□□□□ 0
LDLR-204ENST00000545707 CRELD1Q96HD1 420 aa15.06■□□□□ 0
LDLR-204ENST00000545707 EFCAB11Q9BUY7 163 aa15.06■□□□□ 0
LDLR-204ENST00000545707 MARCH7Q9H992 704 aa15.06■□□□□ 0
LDLR-204ENST00000545707 GPBP1L1Q9HC44 474 aaPredicted RBP15.06■□□□□ 0
LDLR-204ENST00000545707 MYNNQ9NPC7 610 aa15.06■□□□□ 0
LDLR-204ENST00000545707 CLN6Q9NWW5 311 aa15.06■□□□□ 0
LDLR-204ENST00000545707 ANGPT4Q9Y264 503 aa15.06■□□□□ 0
LDLR-204ENST00000545707 UGT2A1Q9Y4X1 527 aa15.06■□□□□ 0
LDLR-204ENST00000545707 KLK4Q9Y5K2 254 aa15.06■□□□□ 0
LDLR-204ENST00000545707 CHRM5P08912 532 aaPredicted RBP15.05■□□□□ 0
LDLR-204ENST00000545707 LAG3P18627 525 aa15.05■□□□□ 0
LDLR-204ENST00000545707 PTX3P26022 381 aaPredicted RBP15.05■□□□□ 0
LDLR-204ENST00000545707 NTHL1P78549 312 aa15.05■□□□□ 0
LDLR-204ENST00000545707 NOGQ13253 232 aa15.05■□□□□ 0
LDLR-204ENST00000545707 ZNF658BQ4V348 819 aaPredicted RBP15.05■□□□□ 0
LDLR-204ENST00000545707 SPANXN2Q5MJ10 180 aa15.05■□□□□ 0
LDLR-204ENST00000545707 ZNF770Q6IQ21 691 aaPredicted RBP15.05■□□□□ 0
LDLR-204ENST00000545707 CNKSR3Q6P9H4 555 aa15.05■□□□□ 0
LDLR-204ENST00000545707 LILRA6Q6PI73 481 aa15.05■□□□□ 0
LDLR-204ENST00000545707 PAQR6Q6TCH4 344 aa15.05■□□□□ 0
LDLR-204ENST00000545707 ZNF367Q7RTV3 350 aa15.05■□□□□ 0
LDLR-204ENST00000545707 ST13P5Q8NFI4 369 aaPredicted RBP15.05■□□□□ 0
LDLR-204ENST00000545707 GPR32P1Q8NGA4 272 aa15.05■□□□□ 0
LDLR-204ENST00000545707 UCN3Q969E3 161 aa15.05■□□□□ 0
LDLR-204ENST00000545707 TXNDC15Q96J42 360 aa15.05■□□□□ 0
LDLR-204ENST00000545707 OPALINQ96PE5 141 aa15.05■□□□□ 0
LDLR-204ENST00000545707 SGPP1Q9BX95 441 aa15.05■□□□□ 0
LDLR-204ENST00000545707 CDCA4Q9BXL8 241 aa15.05■□□□□ 0
LDLR-204ENST00000545707 TDP1Q9NUW8 608 aa15.05■□□□□ 0
LDLR-204ENST00000545707 PEX16Q9Y5Y5 336 aa15.05■□□□□ 0
LDLR-204ENST00000545707 AP1M2Q9Y6Q5 423 aa15.05■□□□□ 0
LDLR-204ENST00000545707 LINC00854A0A1B0GVQ3 168 aa15.05■□□□□ -0
LDLR-204ENST00000545707 EFCAB10A6NFE3 127 aa15.05■□□□□ -0
LDLR-204ENST00000545707 CCRL2O00421 344 aa15.05■□□□□ -0
LDLR-204ENST00000545707 RGS5O15539 181 aa15.05■□□□□ -0
LDLR-204ENST00000545707 SH3BP5O60239 455 aa15.05■□□□□ -0
LDLR-204ENST00000545707 TPST2O60704 377 aa15.05■□□□□ -0
LDLR-204ENST00000545707 RPS19P39019 145 aaKnown RBP15.05■□□□□ -0
LDLR-204ENST00000545707 NNMTP40261 264 aa15.05■□□□□ -0
LDLR-204ENST00000545707 OLR1P78380 273 aa15.05■□□□□ -0
LDLR-204ENST00000545707 DEF8Q6ZN54 512 aa15.05■□□□□ -0
LDLR-204ENST00000545707 ZNF547Q8IVP9 402 aa15.05■□□□□ -0
LDLR-204ENST00000545707 LRRC56Q8IYG6 542 aaPredicted RBP15.05■□□□□ -0
LDLR-204ENST00000545707 ADGRF3Q8IZF5 1079 aa15.05■□□□□ -0
LDLR-204ENST00000545707 SLC34A3Q8N130 599 aa15.05■□□□□ -0
LDLR-204ENST00000545707 SLAIN1Q8ND83 568 aa15.05■□□□□ -0
LDLR-204ENST00000545707 OR4D11Q8NGI4 311 aa15.05■□□□□ -0
LDLR-204ENST00000545707 TRMT61AQ96FX7 289 aaKnown RBP15.05■□□□□ -0
LDLR-204ENST00000545707 ZSWIM3Q96MP5 696 aa15.05■□□□□ -0
LDLR-204ENST00000545707 MAPKAP1Q9BPZ7 522 aa15.05■□□□□ -0
LDLR-204ENST00000545707 NLNQ9BYT8 704 aa15.05■□□□□ -0
LDLR-204ENST00000545707 ZBP1Q9H171 429 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms