RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 MTCP1P56278 107 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 ITPK1Q13572 414 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 RUNX3Q13761 415 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 BECN1Q14457 450 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 Q1RN00 199 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 ATAD3CQ5T2N8 411 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 TMUB2Q71RG4 321 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 RPAINQ86UA6 219 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 DND1Q8IYX4 353 aaKnown RBP3.46□□□□□ -1.86
SNHG1-224ENST00000545688 MRAPQ8TCY5 172 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 HDAC11Q96DB2 347 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 LURAP1Q96LR2 239 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 PAPOLGQ9BWT3 736 aaKnown RBP3.46□□□□□ -1.86
SNHG1-224ENST00000545688 STRADBQ9C0K7 418 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 CLEC5AQ9NY25 188 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 ABCD2Q9UBJ2 740 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 POLLQ9UGP5 575 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 NAALAD2Q9Y3Q0 740 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 PALLDQ8WX93 1383 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 USP47Q96K76 1375 aa3.46□□□□□ -1.86
SNHG1-224ENST00000545688 BRCA1P38398 1863 aaKnown RBP3.45□□□□□ -1.86
SNHG1-224ENST00000545688 MEGF6O75095 1541 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 MAP2P11137 1827 aaKnown RBP3.45□□□□□ -1.86
SNHG1-224ENST00000545688 A0A1B0GTH9 108 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 SIGLEC5O15389 551 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 SH3BP5O60239 455 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 FDPSP14324 419 aaKnown RBP3.45□□□□□ -1.86
SNHG1-224ENST00000545688 ELK3P41970 407 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 LYZP61626 148 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 MAPRE1Q15691 268 aaKnown RBP3.45□□□□□ -1.86
SNHG1-224ENST00000545688 DHRS11Q6UWP2 260 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 AMIGO1Q86WK6 493 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 MFN1Q8IWA4 741 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 ZC3H3Q8IXZ2 948 aaKnown RBP3.45□□□□□ -1.86
SNHG1-224ENST00000545688 NABP1Q96AH0 204 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 GDAP1L1Q96MZ0 367 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 ZNF558Q96NG5 402 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 ZIM3Q96PE6 472 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 SNX25Q9H3E2 840 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 FZD8Q9H461 694 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 AUP1Q9Y679 476 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 HEG1Q9ULI3 1381 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 CD163L1Q9NR16 1453 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 FAM208AQ9UK61 1670 aaKnown RBP3.45□□□□□ -1.86
SNHG1-224ENST00000545688 UBR3Q6ZT12 1888 aa3.45□□□□□ -1.86
SNHG1-224ENST00000545688 MAP3K19Q56UN5 1328 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 CENPJQ9HC77 1338 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-224ENST00000545688 C4BP0C0L5 1744 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 SZT2Q5T011 3432 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 TNRC6CQ9HCJ0 1690 aaKnown RBP3.44□□□□□ -1.86
SNHG1-224ENST00000545688 VENTXO95231 258 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 MT-ND1P03886 318 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 CD1DP15813 335 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 EPORP19235 508 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 CPT2P23786 658 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 KNOP1Q1ED39 458 aaKnown RBP3.44□□□□□ -1.86
SNHG1-224ENST00000545688 FUT10Q6P4F1 479 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 ENPP7Q6UWV6 458 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-224ENST00000545688 MCM10Q7L590 875 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 PRPF39Q86UA1 669 aaKnown RBP3.44□□□□□ -1.86
SNHG1-224ENST00000545688 PRSS35Q8N3Z0 413 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 PI4KAP1Q8N8J0 262 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 ITLN1Q8WWA0 313 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 P2RX5Q93086 422 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 FN3KQ9H479 309 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 C3orf14Q9HBI5 128 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 EXOC1Q9NV70 894 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 ANAPC11Q9NYG5 84 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 NYAP2Q9P242 653 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 TAF1LQ8IZX4 1826 aa3.44□□□□□ -1.86
SNHG1-224ENST00000545688 C5P01031 1676 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 KDRP35968 1356 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 ARFGEF1Q9Y6D6 1849 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 K7ENM7 598 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 INPP4BO15327 924 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 DIAPH2O60879 1101 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 RECQL5O94762 991 aaPredicted RBP3.43□□□□□ -1.86
SNHG1-224ENST00000545688 ACAT1P24752 427 aaKnown RBP3.43□□□□□ -1.86
SNHG1-224ENST00000545688 GCKRQ14397 625 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 TMEM44Q2T9K0 475 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 EMBQ6PCB8 327 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 Q6ZVH6 145 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 ENOSF1Q7L5Y1 443 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 PRUNE1Q86TP1 453 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 HIPK1Q86Z02 1210 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 TEX26Q8N6G2 289 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 CCDC185Q8N715 623 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 APOL2Q9BQE5 337 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 GTPBP2Q9BX10 602 aaKnown RBP3.43□□□□□ -1.86
SNHG1-224ENST00000545688 WDR35Q9P2L0 1181 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 SLC12A6Q9UHW9 1150 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 PKD1L3Q7Z443 1732 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 SBF1O95248 1867 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 NCAPD2Q15021 1401 aa3.43□□□□□ -1.86
SNHG1-224ENST00000545688 DOT1LQ8TEK3 1739 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 COL6A3P12111 3177 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 A8MU76 341 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 KIF5CO60282 957 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 FCGR2BP31994 310 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms