RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 FBXO5Q9UKT4 447 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 EML6Q6ZMW3 1958 aa13.58□□□□□ -0.24
RTN3-214ENST00000545432 FBN1P35555 2871 aaKnown RBP13.57□□□□□ -0.24
RTN3-214ENST00000545432 CLCA1A8K7I4 914 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 CTNSO60931 367 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 IPO7O95373 1038 aaKnown RBP13.57□□□□□ -0.24
RTN3-214ENST00000545432 P04436 131 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 SERPIND1P05546 499 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 HIST1H2AGP0C0S8 130 aaPredicted RBP13.57□□□□□ -0.24
RTN3-214ENST00000545432 RFPL3SP0C7P2 107 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 MLNP12872 115 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 HIST1H2ADP20671 130 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 BMP5P22003 454 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 ZNF136P52737 540 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 RNF4P78317 190 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 TBL3Q12788 808 aaKnown RBP13.57□□□□□ -0.24
RTN3-214ENST00000545432 THOC5Q13769 683 aaKnown RBP13.57□□□□□ -0.24
RTN3-214ENST00000545432 ACSF3Q4G176 576 aaPredicted RBP13.57□□□□□ -0.24
RTN3-214ENST00000545432 SEL1L2Q5TEA6 688 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 PAQR3Q6TCH7 311 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 LYPD8Q6UX82 237 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 CAPN12Q6ZSI9 719 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 CIARTQ8N365 385 aaPredicted RBP13.57□□□□□ -0.24
RTN3-214ENST00000545432 OR5L2Q8NGL0 311 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 CALML6Q8TD86 181 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 HIST1H2AHQ96KK5 128 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 HIST1H2AJQ99878 128 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 H2AFJQ9BTM1 129 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 ZNF395Q9H8N7 513 aaPredicted RBP13.57□□□□□ -0.24
RTN3-214ENST00000545432 ZFP64Q9NPA5 681 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 ALKBH4Q9NXW9 302 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 ZKSCAN5Q9Y2L8 839 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 IKBKGQ9Y6K9 419 aa13.57□□□□□ -0.24
RTN3-214ENST00000545432 ARHGEF9O43307 516 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 TBX6O95947 436 aaPredicted RBP13.56□□□□□ -0.24
RTN3-214ENST00000545432 IL18BPO95998 194 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 HNF4AP41235 474 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 BTN3A2P78410 334 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 PCBP2Q15366 365 aaKnown RBP eCLIP13.56□□□□□ -0.243e-35■■■■■ 31.2
RTN3-214ENST00000545432 ADPRMQ3LIE5 342 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 NXPE4Q6UWF7 544 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 LACC1Q8IV20 430 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 PALM2Q8IXS6 379 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 MYO1HQ8N1T3 1032 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 ZNF321PQ8N8H1 164 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 SIMC1Q8NDZ2 872 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 OR14A16Q8NHC5 309 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 LINC01560Q8TB33 94 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 ATL1Q8WXF7 558 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 SMPDL3BQ92485 455 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 GAL3ST3Q96A11 431 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 ALKBH8Q96BT7 664 aaKnown RBP13.56□□□□□ -0.24
RTN3-214ENST00000545432 MS4A6EQ96DS6 147 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 DACH2Q96NX9 599 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 AIF1LQ9BQI0 150 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 REPIN1Q9BWE0 567 aaKnown RBP13.56□□□□□ -0.24
RTN3-214ENST00000545432 PRDM14Q9GZV8 571 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 TRMT1Q9NXH9 659 aaKnown RBP13.56□□□□□ -0.24
RTN3-214ENST00000545432 TAS2R13Q9NYV9 303 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 TRMT6Q9UJA5 497 aaKnown RBP13.56□□□□□ -0.24
RTN3-214ENST00000545432 ADAM21Q9UKJ8 722 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 CLCA3PQ9Y6N3 262 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 CAPN6Q9Y6Q1 641 aa13.56□□□□□ -0.24
RTN3-214ENST00000545432 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.56□□□□□ -0.24
RTN3-214ENST00000545432 LRRC3CA6NJW4 275 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 SDR42E2A6NKP2 422 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 KDM4EB2RXH2 506 aaPredicted RBP13.55□□□□□ -0.24
RTN3-214ENST00000545432 GABRB3P28472 473 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 PIGAP37287 484 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 MAGEA3P43357 314 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 STXBP1P61764 594 aaKnown RBP13.55□□□□□ -0.24
RTN3-214ENST00000545432 SARNPP82979 210 aaKnown RBP13.55□□□□□ -0.24
RTN3-214ENST00000545432 CCZ1BP86790 482 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 CCZ1P86791 482 aaPredicted RBP13.55□□□□□ -0.24
RTN3-214ENST00000545432 BMPR2Q13873 1038 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 SLC22A10Q63ZE4 541 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 NSUN5P2Q63ZY6 315 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 RNF10Q8N5U6 811 aaKnown RBP13.55□□□□□ -0.24
RTN3-214ENST00000545432 MCUQ8NE86 351 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 NUBPLQ8TB37 319 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 ZNF721Q8TF20 911 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 ZNF669Q96BR6 464 aaPredicted RBP13.55□□□□□ -0.24
RTN3-214ENST00000545432 NTNG2Q96CW9 530 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 PDLIM5Q96HC4 596 aaKnown RBP13.55□□□□□ -0.24
RTN3-214ENST00000545432 ARL15Q9NXU5 204 aa13.55□□□□□ -0.24
RTN3-214ENST00000545432 ANK3Q12955 4377 aaKnown RBP13.54□□□□□ -0.24
RTN3-214ENST00000545432 LRIT2A6NDA9 550 aa13.54□□□□□ -0.24
RTN3-214ENST00000545432 MBD3L4A6NDZ8 208 aaPredicted RBP13.54□□□□□ -0.24
RTN3-214ENST00000545432 MBD3L3A6NE82 208 aaPredicted RBP13.54□□□□□ -0.24
RTN3-214ENST00000545432 MBD3L5A6NJ08 208 aaPredicted RBP13.54□□□□□ -0.24
RTN3-214ENST00000545432 CD8B2A6NJW9 211 aa13.54□□□□□ -0.24
RTN3-214ENST00000545432 ENO2P09104 434 aaPredicted RBP13.54□□□□□ -0.24
RTN3-214ENST00000545432 GSTM2P28161 218 aa13.54□□□□□ -0.24
RTN3-214ENST00000545432 HNRNPH1P31943 449 aaKnown RBP13.54□□□□□ -0.24
RTN3-214ENST00000545432 CRYZQ08257 329 aaKnown RBP13.54□□□□□ -0.24
RTN3-214ENST00000545432 KIF5AQ12840 1032 aa13.54□□□□□ -0.24
RTN3-214ENST00000545432 SLC13A2Q13183 592 aa13.54□□□□□ -0.24
RTN3-214ENST00000545432 TOR1AIP1Q5JTV8 583 aa13.54□□□□□ -0.24
RTN3-214ENST00000545432 KLHDC8AQ8IYD2 350 aa13.54□□□□□ -0.24
RTN3-214ENST00000545432 AGGF1Q8N302 714 aaeCLIP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms