RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 PMP22Q01453 160 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 ACY1Q03154 408 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 TOP3AQ13472 1001 aaPredicted RBP6.32□□□□□ -1.4
LDHA-223ENST00000545215 OLIG2Q13516 323 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 SLMAPQ14BN4 828 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 TAF1AQ15573 450 aaPredicted RBP6.32□□□□□ -1.4
LDHA-223ENST00000545215 KHDC1LQ5JSQ8 128 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 PCID2Q5JVF3 399 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 SIRPB2Q5JXA9 342 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 CACHD1Q5VU97 1274 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 ATG9BQ674R7 924 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 PDPK2PQ6A1A2 396 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 WDR93Q6P2C0 686 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 DOK6Q6PKX4 331 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 GLT6D1Q7Z4J2 308 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 ATG4DQ86TL0 474 aaPredicted RBP6.32□□□□□ -1.4
LDHA-223ENST00000545215 TSPAN33Q86UF1 283 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 LMNTD2Q8IXW0 634 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.32□□□□□ -1.42e-6■■■■□ 22.9
LDHA-223ENST00000545215 SIDT2Q8NBJ9 832 aaKnown RBP6.32□□□□□ -1.4
LDHA-223ENST00000545215 PPHLN1Q8NEY8 458 aaKnown RBP6.32□□□□□ -1.4
LDHA-223ENST00000545215 BRIX1Q8TDN6 353 aaKnown RBP6.32□□□□□ -1.4
LDHA-223ENST00000545215 STYXQ8WUJ0 223 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 GFM2Q969S9 779 aaKnown RBP6.32□□□□□ -1.4
LDHA-223ENST00000545215 ZBTB9Q96C00 473 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 SLC41A2Q96JW4 573 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 ZNF514Q96K75 400 aaPredicted RBP6.32□□□□□ -1.4
LDHA-223ENST00000545215 SERPINB12Q96P63 405 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 OR2M4Q96R27 311 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 TRIM51Q9BSJ1 452 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 TEX101Q9BY14 249 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 TRIM54Q9BYV2 358 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 GPR63Q9BZJ6 419 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 TRIM31Q9BZY9 425 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 DPH5Q9H2P9 285 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 MRPL46Q9H2W6 279 aaKnown RBP6.32□□□□□ -1.4
LDHA-223ENST00000545215 ESRP2Q9H6T0 727 aaKnown RBP6.32□□□□□ -1.4
LDHA-223ENST00000545215 CNTD2Q9H8S5 307 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 GRHL1Q9NZI5 618 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 PKD2L2Q9NZM6 624 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 DNAJC16Q9Y2G8 782 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 PKP3Q9Y446 797 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 ANKRD36A6QL64 1941 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 TENM3Q9P273 2699 aa6.32□□□□□ -1.4
LDHA-223ENST00000545215 C1orf232A0A0U1RR37 186 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 MROH6A6NGR9 719 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 E7ESA3 106 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 F2RL2O00254 374 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 PFDN6O15212 129 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 STX7O15400 261 aaKnown RBP6.31□□□□□ -1.4
LDHA-223ENST00000545215 ASNA1O43681 348 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 POLBP06746 335 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 IVLP07476 585 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 RHOXF2BP0C7M4 288 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 PGAM1P18669 254 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 PPARGP37231 505 aaPredicted RBP6.31□□□□□ -1.4
LDHA-223ENST00000545215 CD151P48509 253 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 STC1P52823 247 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 PLTPP55058 493 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 TAP2Q03519 686 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 FRG1Q14331 258 aaKnown RBP6.31□□□□□ -1.4
LDHA-223ENST00000545215 GALNT3Q14435 633 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 IHHQ14623 411 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 PTPRRQ15256 657 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 MPEG1Q2M385 716 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 CCDC38Q502W7 563 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 HSP90B2PQ58FF3 399 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 LRRC66Q68CR7 880 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 ZNF449Q6P9G9 518 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 RFLNAQ6ZTI6 216 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 MARK2Q7KZI7 788 aaKnown RBP6.31□□□□□ -1.4
LDHA-223ENST00000545215 PRUNE1Q86TP1 453 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 TRIM74Q86UV6 250 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 SYTL1Q8IYJ3 562 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 SLC25A41Q8N5S1 370 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 OR52K1Q8NGK4 314 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 OR8K5Q8NH50 307 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 FBXO25Q8TCJ0 367 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 BLOC1S5Q8TDH9 187 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 SCAMP4Q969E2 229 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 AP2M1Q96CW1 435 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 ZBED6CLQ96FA7 236 aaPredicted RBP6.31□□□□□ -1.4
LDHA-223ENST00000545215 TTC25Q96NG3 672 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 PLEKHG4BQ96PX9 1271 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 FMO2Q99518 471 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 RHOXF2Q9BQY4 288 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 KIFC1Q9BW19 673 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 SHARPINQ9H0F6 387 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 MYLK2Q9H1R3 596 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 ABCG8Q9H221 673 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 STN1Q9H668 368 aaKnown RBP6.31□□□□□ -1.4
LDHA-223ENST00000545215 PCMTD2Q9NV79 361 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 PLA2G3Q9NZ20 509 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 SEMA5BQ9P283 1151 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 CD84Q9UIB8 345 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 SLC17A4Q9Y2C5 497 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 GPR52Q9Y2T5 361 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 TMEM98Q9Y2Y6 226 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 ZNF711Q9Y462 761 aa6.31□□□□□ -1.4
LDHA-223ENST00000545215 LILRA5A6NI73 299 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms