RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 NID1P14543 1247 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 CCND1P24385 295 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 CYLC1P35663 651 aaPredicted RBP8.63□□□□□ -1.03
CHD4-212ENST00000545083 NAP1L1P55209 391 aaKnown RBP8.63□□□□□ -1.03
CHD4-212ENST00000545083 HSD17B7P56937 341 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 RNF4P78317 190 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 CCZ1BP86790 482 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 CCZ1P86791 482 aaPredicted RBP8.63□□□□□ -1.03
CHD4-212ENST00000545083 REEP5Q00765 189 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 TIAL1Q01085 375 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHD4-212ENST00000545083 DHX9Q08211 1270 aaKnown RBP8.63□□□□□ -1.03
CHD4-212ENST00000545083 CRYZQ08257 329 aaKnown RBP8.63□□□□□ -1.03
CHD4-212ENST00000545083 SLC13A2Q13183 592 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 TBX2Q13207 712 aaPredicted RBP8.63□□□□□ -1.03
CHD4-212ENST00000545083 SNX1Q13596 522 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 SIX1Q15475 284 aaPredicted RBP8.63□□□□□ -1.03
CHD4-212ENST00000545083 ELAVL1Q15717 326 aaKnown RBP8.63□□□□□ -1.03
CHD4-212ENST00000545083 TOR1AIP1Q5JTV8 583 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 PRAMEF20Q5VT98 475 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 NSUN5P2Q63ZY6 315 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 ZNF470Q6ECI4 717 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 OPN5Q6U736 354 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 LYPD8Q6UX82 237 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 CNGA4Q8IV77 575 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 TMEM132CQ8N3T6 1108 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 TC2NQ8N9U0 490 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 OR56A3Q8NH54 315 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 PTPMT1Q8WUK0 201 aaPredicted RBP8.63□□□□□ -1.03
CHD4-212ENST00000545083 EEF1AKMT1Q8WVE0 214 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 C1orf54Q8WWF1 131 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 PIGTQ969N2 578 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 NEIL2Q969S2 332 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 CSF3RQ99062 836 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 OR8D2Q9GZM6 311 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 ZFP64Q9NPA5 681 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 INTS10Q9NVR2 710 aaKnown RBP8.63□□□□□ -1.03
CHD4-212ENST00000545083 GALNT8Q9NY28 637 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 PAK5Q9P286 719 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 USF3Q68DE3 2245 aa8.63□□□□□ -1.03
CHD4-212ENST00000545083 C15orf38-AP3S2A0A0A6YYH1 394 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 TCRBV7S3A2A0A539 114 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 CTAGE9A4FU28 777 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 CBFA2T2O43439 604 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 LRATO95237 230 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 CNOT4O95628 575 aaKnown RBP8.62□□□□□ -1.03
CHD4-212ENST00000545083 FTCDO95954 541 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 IFNA16P05015 189 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 BMP7P18075 431 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 CTSSP25774 331 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 AHRP35869 848 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 SLC1A2P43004 574 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 RAB38P57729 211 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 KCNJ2P63252 427 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 BTN3A2P78410 334 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 ASPHQ12797 758 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 FOXF2Q12947 444 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 DUSP8Q13202 625 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 PDAP1Q13442 181 aaKnown RBP8.62□□□□□ -1.03
CHD4-212ENST00000545083 SPA17Q15506 151 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 ZNF791Q3KP31 576 aaPredicted RBP8.62□□□□□ -1.03
CHD4-212ENST00000545083 SLC22A10Q63ZE4 541 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 HMBOX1Q6NT76 420 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 UGT3A1Q6NUS8 523 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 PEX26Q7Z412 305 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 LIX1Q8N485 282 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 CCDC89Q8N998 374 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 C9orf106Q8NAJ2 232 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 MORN4Q8NDC4 146 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 PAQR8Q8TEZ7 354 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 SLC5A11Q8WWX8 675 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 HSPBAP1Q96EW2 488 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 TSNARE1Q96NA8 513 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 TRIB1Q96RU8 372 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 CCL19Q99731 98 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 RBM24Q9BX46 236 aaKnown RBP8.62□□□□□ -1.03
CHD4-212ENST00000545083 PRDM14Q9GZV8 571 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 PARVBQ9HBI1 364 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 C6orf203Q9P0P8 240 aaPredicted RBP8.62□□□□□ -1.03
CHD4-212ENST00000545083 AMFRQ9UKV5 643 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 REXO2Q9Y3B8 237 aaKnown RBP8.62□□□□□ -1.03
CHD4-212ENST00000545083 CLCA3PQ9Y6N3 262 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 MED12Q93074 2177 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 FREM3P0C091 2139 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 DOCK7Q96N67 2140 aa8.62□□□□□ -1.03
CHD4-212ENST00000545083 MBD3L3A6NE82 208 aaPredicted RBP8.61□□□□□ -1.03
CHD4-212ENST00000545083 URADA6NGE7 173 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 CD8B2A6NJW9 211 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 BTNL10A8MVZ5 291 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 DEFB108AA8MXU0 73 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 EIF3FO00303 357 aaPredicted RBP8.61□□□□□ -1.03
CHD4-212ENST00000545083 CYR61O00622 381 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 GPR37O15354 613 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 ETHE1O95571 254 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 C8GP07360 202 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 SERPINA6P08185 405 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 HNRNPH1P31943 449 aaKnown RBP8.61□□□□□ -1.03
CHD4-212ENST00000545083 OPRM1P35372 400 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 SOX18P35713 384 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 SLCO1A2P46721 670 aa8.61□□□□□ -1.03
CHD4-212ENST00000545083 BASP1P80723 227 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms