RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 GTF2H2CQ6P1K8 395 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 MED27Q6P2C8 311 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 PAOXQ6QHF9 649 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 IGFL3Q6UXB1 125 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 PLD6Q8N2A8 252 aaKnown RBP6.94□□□□□ -1.3
CPSF7-224ENST00000544990 TEX9Q8N6V9 391 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 OR2L5Q8NG80 312 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 OR5T3Q8NGG3 340 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 FBLIM1Q8WUP2 373 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 ATP6V1E2Q96A05 226 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 TBC1D20Q96BZ9 403 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 REPS1Q96D71 796 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 MS4A6EQ96DS6 147 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 SMIM10Q96HG1 83 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 GPR78Q96P69 363 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 LMF1Q96S06 567 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 MRPL57Q9BQC6 102 aaKnown RBP6.94□□□□□ -1.3
CPSF7-224ENST00000544990 NPLQ9BXD5 320 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-224ENST00000544990 ROGDIQ9GZN7 287 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 REXO4Q9GZR2 422 aaKnown RBP6.94□□□□□ -1.3
CPSF7-224ENST00000544990 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF700Q9H0M5 742 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 EPN3Q9H201 632 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 RHBGQ9H310 441 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 KLHL31Q9H511 634 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 EPS8L2Q9H6S3 715 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 COPS7BQ9H9Q2 264 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-224ENST00000544990 SLAMF7Q9NQ25 335 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 FETUBQ9UGM5 382 aa6.94□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF490Q9ULM2 529 aaPredicted RBP6.94□□□□□ -1.3
CPSF7-224ENST00000544990 ASH1LQ9NR48 2969 aaKnown RBP6.93□□□□□ -1.3
CPSF7-224ENST00000544990 SYNDIG1LA6NDD5 238 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 MAGEB17A8MXT2 336 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 STX16-NPEPL1H3BU86 382 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 CLDN4O14493 209 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 STX16O14662 325 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 B3GALT2O43825 422 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 UGDHO60701 494 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 PRAMEF4O60810 478 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 DNAJA2O60884 412 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 B4GALT2O60909 372 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 CDC123O75794 336 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-224ENST00000544990 PRR35P0CG20 571 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 PCNAP12004 261 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 EPORP19235 508 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 TAC1P20366 129 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 TNFRSF8P28908 595 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 HNRNPH1P31943 449 aaKnown RBP6.93□□□□□ -1.3
CPSF7-224ENST00000544990 NTF4P34130 210 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 ARL1P40616 181 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-224ENST00000544990 PLA2G16P53816 162 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 MTTPP55157 894 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 OR4D2P58180 307 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 OLR1P78380 273 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 RHAGQ02094 409 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 Q0VFX4 171 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 ABRAXAS2Q15018 415 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 PCOLCEQ15113 449 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 EXT1Q16394 746 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 ADPRMQ3LIE5 342 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 NADK2Q4G0N4 442 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 CRB2Q5IJ48 1285 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 PRAMEF9Q5VWM5 478 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 GRHL2Q6ISB3 625 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 CDPF1Q6NVV7 123 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 JMJD6Q6NYC1 403 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-224ENST00000544990 VHLLQ6RSH7 139 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 ISLR2Q6UXK2 745 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 TIFABQ6ZNK6 161 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 QSOX2Q6ZRP7 698 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 ANKRD37Q7Z713 158 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 LCA5Q86VQ0 697 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 MYLK4Q86YV6 388 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-224ENST00000544990 LAS2Q8IYD9 372 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 CA13Q8N1Q1 262 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 RBMXL3Q8N7X1 1067 aaKnown RBP6.93□□□□□ -1.3
CPSF7-224ENST00000544990 PTGR2Q8N8N7 351 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-224ENST00000544990 LRRN4CLQ8ND94 238 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 DNAJB14Q8TBM8 379 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 ACMSDQ8TDX5 336 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 ADAMTS18Q8TE60 1221 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 PPP4R1Q8TF05 950 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 UBLCP1Q8WVY7 318 aaPredicted RBP6.93□□□□□ -1.3
CPSF7-224ENST00000544990 PNPLA2Q96AD5 504 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 PHF21BQ96EK2 531 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 CMTM7Q96FZ5 175 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 IMMP1LQ96LU5 166 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 PTCHD1Q96NR3 888 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 SERINC2Q96SA4 455 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 LPAR4Q99677 370 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 CENPKQ9BS16 269 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 TBCDQ9BTW9 1192 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 TXLNGYQ9BZA5 131 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 TRIM4Q9C037 500 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 MRPL46Q9H2W6 279 aaKnown RBP6.93□□□□□ -1.3
CPSF7-224ENST00000544990 IPPKQ9H8X2 491 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 ACTR8Q9H981 624 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 PPCSQ9HAB8 311 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 LANCL2Q9NS86 450 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 PSMC3IPQ9P2W1 217 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms