RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	NDUFV3	P56181	108 aa	Known RBP	3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	SRPX	P78539	464 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	CD300C	Q08708	224 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	RBBP4	Q09028	425 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	RPS6KA1	Q15418	735 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	IFI44L	Q53G44	452 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	FAM182A	Q5T1J6	154 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	SNRNP48	Q6IEG0	339 aa	Known RBP	3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	ALKBH5	Q6P6C2	394 aa	Known RBP	3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	MCM10	Q7L590	875 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	TRPV3	Q8NET8	790 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	LPCAT1	Q8NF37	534 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	RNASE8	Q8TDE3	154 aa	Known RBP	3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	GANC	Q8TET4	914 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	FAM222B	Q8WU58	562 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	NABP1	Q96AH0	204 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	ZNF597	Q96LX8	424 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	GUCD1	Q96NT3	240 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	ALKBH3	Q96Q83	286 aa	Predicted RBP	3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	DDX50	Q9BQ39	737 aa	Known RBP	3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	UBXN6	Q9BZV1	441 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	TRIM6	Q9C030	488 aa	Predicted RBP	3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	PLEKHA3	Q9HB20	300 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	UBE2T	Q9NPD8	197 aa	Predicted RBP	3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	CWC25	Q9NXE8	425 aa	Predicted RBP	3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	PLEK2	Q9NYT0	353 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	GTSE1	Q9NYZ3	720 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	FBXW2	Q9UKT8	454 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	ERVK-19	Q9WJR5	959 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	KCNK6	Q9Y257	313 aa		3.42	□□□□□ -1.86
RAP1B-231	ENST00000544639	SLC15A5	A6NIM6	579 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	CCER2	I3L3R5	266 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	CACNB4	O00305	520 aa	Predicted RBP	3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	STBD1	O95210	358 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	GOSR1	O95249	250 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	LYN	P07948	512 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	GSTA2	P09210	222 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	NUDT17	P0C025	328 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	CPA3	P15088	417 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	GATA1	P15976	413 aa	Predicted RBP	3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	GLRA1	P23415	457 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	RPL9	P32969	192 aa	Known RBP	3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	ZFP36L2	P47974	494 aa	Known RBP	3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	ATP4B	P51164	291 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	KIAA1024L	P59773	190 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	GABPA	Q06546	454 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	TEF	Q10587	303 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	LCP2	Q13094	533 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	MEF2D	Q14814	521 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	SIX1	Q15475	284 aa	Predicted RBP	3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	SGCB	Q16585	318 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	ODF2	Q5BJF6	829 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	CAPN13	Q6MZZ7	669 aa	Predicted RBP	3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	CD164L2	Q6UWJ8	174 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	SLC47A2	Q86VL8	602 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	UNC45B	Q8IWX7	931 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	NAT8L	Q8N9F0	302 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	CCDC197	Q8NCU1	140 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	PRCC	Q92733	491 aa	Predicted RBP	3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	HAS2	Q92819	552 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	TAAR6	Q96RI8	345 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	TNFRSF13C	Q96RJ3	184 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	S1PR3	Q99500	378 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	CCDC28B	Q9BUN5	200 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	TSPYL1	Q9H0U9	437 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	MOB1A	Q9H8S9	216 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	WDR41	Q9HAD4	459 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	GNB4	Q9HAV0	340 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	NMUR1	Q9HB89	426 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	FOXA2	Q9Y261	457 aa	Predicted RBP	3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	OR1A2	Q9Y585	309 aa		3.41	□□□□□ -1.86
RAP1B-231	ENST00000544639	TRGV8	A0A0C4DH27	118 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	TRBV5-4	A0A0C4DH59	114 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	OR5H15	A6NDH6	313 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	C5orf51	A6NDU8	294 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	PDHX	O00330	501 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	FBP2	O00757	339 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	CSDE1	O75534	798 aa	Known RBP	3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	GAS8	O95995	478 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	EPO	P01588	193 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	IGHV3-13	P01766	116 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	EZR	P15311	586 aa	Known RBP	3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	PRELP	P51888	382 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	FCHO2	Q0JRZ9	810 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	RIG	Q13278	110 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	ECSCR	Q19T08	205 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	ZNF730	Q6ZMV8	503 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	C17orf64	Q86WR6	236 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	TBC1D10C	Q8IV04	446 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	CLEC1A	Q8NC01	280 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	RASL10A	Q92737	203 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	CFAP36	Q96G28	342 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	PDLIM5	Q96HC4	596 aa	Known RBP	3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	AGPAT1	Q99943	283 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	SOST	Q9BQB4	213 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	ZNF577	Q9BSK1	485 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	NTMT1	Q9BV86	223 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	MRPL9	Q9BYD2	267 aa	Known RBP	3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	STRADB	Q9C0K7	418 aa		3.4	□□□□□ -1.87
RAP1B-231	ENST00000544639	HEXA-AS1	Q9H8Q6	139 aa		3.4	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms