RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 C2orf83Q53S99 150 aa2.41□□□□□ -2.02
CCDC170-203ENST00000544131 SPOUT1Q5T280 376 aaKnown RBP2.41□□□□□ -2.02
CCDC170-203ENST00000544131 PLPP4Q5VZY2 271 aa2.41□□□□□ -2.02
CCDC170-203ENST00000544131 LIPJQ5W064 366 aa2.41□□□□□ -2.02
CCDC170-203ENST00000544131 CLEC4GQ6UXB4 293 aa2.41□□□□□ -2.02
CCDC170-203ENST00000544131 CCDC186Q7Z3E2 898 aa2.41□□□□□ -2.02
CCDC170-203ENST00000544131 VASH2Q86V25 355 aa2.41□□□□□ -2.02
CCDC170-203ENST00000544131 MEX3DQ86XN8 651 aaKnown RBP2.41□□□□□ -2.02
CCDC170-203ENST00000544131 CCDC71Q8IV32 467 aaPredicted RBP2.41□□□□□ -2.02
CCDC170-203ENST00000544131 RIT1Q92963 219 aa2.41□□□□□ -2.02
CCDC170-203ENST00000544131 EXOC4Q96A65 974 aa2.41□□□□□ -2.02
CCDC170-203ENST00000544131 ESAMQ96AP7 390 aa2.41□□□□□ -2.02
CCDC170-203ENST00000544131 BSCL2Q96G97 398 aaPredicted RBP2.41□□□□□ -2.02
CCDC170-203ENST00000544131 PRMT1Q99873 361 aaKnown RBP2.41□□□□□ -2.02
CCDC170-203ENST00000544131 TRIM7Q9C029 511 aa2.41□□□□□ -2.02
CCDC170-203ENST00000544131 SWAP70Q9UH65 585 aa2.41□□□□□ -2.02
CCDC170-203ENST00000544131 ITGA11Q9UKX5 1188 aa2.41□□□□□ -2.02
CCDC170-203ENST00000544131 CLEC4EQ9ULY5 219 aa2.41□□□□□ -2.02
CCDC170-203ENST00000544131 KLF18A0A0U1RQI7 1052 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 CCDC162PA2VCL2 907 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 ZSCAN5CA6NGD5 496 aaPredicted RBP2.4□□□□□ -2.03
CCDC170-203ENST00000544131 ZNF724A8MTY0 619 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 E7ENQ6 273 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 E2F3O00716 465 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 SCO2O43819 266 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 IGHG3P01860 377 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 GBAP04062 536 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 RPN1P04843 607 aaKnown RBP2.4□□□□□ -2.03
CCDC170-203ENST00000544131 OR9G9P0C7N8 305 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 KRT3P12035 628 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 BDNFP23560 247 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 PTAFRP25105 342 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 FASP25445 335 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 PPP2R1AP30153 589 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 OR3A1P47881 315 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 SHEQ5VZ18 495 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 FAM91A1Q658Y4 838 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 TXNRD3NBQ6F5E7 133 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 TMED8Q6PL24 325 aaPredicted RBP2.4□□□□□ -2.03
CCDC170-203ENST00000544131 C16orf54Q6UWD8 224 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 KRT74Q7RTS7 529 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 TMEM99Q8N816 258 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 SAMD12Q8N8I0 201 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 GTSF1Q8WW33 167 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 SEPT8Q92599 483 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 ZBED6CLQ96FA7 236 aaPredicted RBP2.4□□□□□ -2.03
CCDC170-203ENST00000544131 RBM18Q96H35 190 aaKnown RBP2.4□□□□□ -2.03
CCDC170-203ENST00000544131 MAPKAP1Q9BPZ7 522 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 INPP5KQ9BT40 448 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 DEFB126Q9BYW3 111 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 ZBP1Q9H171 429 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 S100A14Q9HCY8 104 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 MED17Q9NVC6 651 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 NKIRAS2Q9NYR9 191 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 CLIC5Q9NZA1 410 aa2.4□□□□□ -2.03
CCDC170-203ENST00000544131 A0A087WV48 116 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 A0A0B4J203 849 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 HDAC3O15379 428 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 GRAP2O75791 330 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 PRB2P02812 416 aaPredicted RBP2.39□□□□□ -2.03
CCDC170-203ENST00000544131 ADRA2CP18825 462 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 GPX3P22352 226 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 ACKR3P25106 362 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 NPY4RP50391 375 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 RAD23AP54725 363 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 NAGLUP54802 743 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 GSG1Q2KHT4 349 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 C1orf141Q5JVX7 400 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 LYPLAL1Q5VWZ2 237 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 DMKNQ6E0U4 476 aaPredicted RBP2.39□□□□□ -2.03
CCDC170-203ENST00000544131 CGB2Q6NT52 195 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 ZNF730Q6ZMV8 503 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 NLRP14Q86W24 1093 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 ANKRD46Q86W74 232 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 CACUL1Q86Y37 369 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 DZIP1Q86YF9 867 aaKnown RBP2.39□□□□□ -2.03
CCDC170-203ENST00000544131 CREBRFQ8IUR6 639 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 SLC22A18ASQ8N1D0 253 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 CLEC1AQ8NC01 280 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 CCDC191Q8NCU4 936 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 BEST4Q8NFU0 473 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 C8orf46Q8TAG6 207 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 SIPA1Q96FS4 1042 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 CDHR1Q96JP9 859 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 CNDP2Q96KP4 475 aaKnown RBP2.39□□□□□ -2.03
CCDC170-203ENST00000544131 FERMT1Q9BQL6 677 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 CCM2Q9BSQ5 444 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 NT5DC2Q9H857 520 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 LMAN1LQ9HAT1 526 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 PFDN4Q9NQP4 134 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 CHCHD3Q9NX63 227 aaKnown RBP2.39□□□□□ -2.03
CCDC170-203ENST00000544131 RCOR3Q9P2K3 495 aaPredicted RBP2.39□□□□□ -2.03
CCDC170-203ENST00000544131 EXOC6BQ9Y2D4 811 aa2.39□□□□□ -2.03
CCDC170-203ENST00000544131 ANKDD1BA6NHY2 528 aa2.38□□□□□ -2.03
CCDC170-203ENST00000544131 SAP18O00422 153 aaKnown RBP2.38□□□□□ -2.03
CCDC170-203ENST00000544131 FIBPO43427 364 aa2.38□□□□□ -2.03
CCDC170-203ENST00000544131 VIMP08670 466 aaKnown RBP2.38□□□□□ -2.03
CCDC170-203ENST00000544131 FAM58BPP0C7Q3 252 aa2.38□□□□□ -2.03
CCDC170-203ENST00000544131 PRKCIP41743 596 aa2.38□□□□□ -2.03
CCDC170-203ENST00000544131 RGRP47804 291 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms