RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 CLDN5O00501 218 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 EIF1AYO14602 144 aaKnown RBP7.52□□□□□ -1.21
VPS13D-211ENST00000543710 INMTO95050 263 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 ASGR2P07307 311 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 COX6B1P14854 86 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 TSPAN8P19075 237 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 GGT1P19440 569 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 MATN1P21941 496 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 EIF1AXP47813 144 aaKnown RBP7.52□□□□□ -1.21
VPS13D-211ENST00000543710 HNRNPFP52597 415 aaKnown RBP7.52□□□□□ -1.21
VPS13D-211ENST00000543710 HSD17B7P56937 341 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 CYP4F2P78329 520 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 ZNF763Q0D2J5 394 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 EIF3IQ13347 325 aaKnown RBP7.52□□□□□ -1.21
VPS13D-211ENST00000543710 MELKQ14680 651 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 NKAPLQ5M9Q1 402 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 TMEM220Q6QAJ8 160 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 LINC00299Q6ZSB3 139 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 GLIS3Q8NEA6 775 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 OR9A1PQ8NGU1 263 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 TMEM234Q8WY98 164 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 LMLNQ96KR4 655 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 MYADMQ96S97 322 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 FBXO4Q9UKT5 387 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 NPIPA1Q9UND3 350 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 ABCG2Q9UNQ0 655 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 TRPM3Q9HCF6 1732 aaPredicted RBP7.52□□□□□ -1.21
VPS13D-211ENST00000543710 HAS3O00219 553 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 LRATO95237 230 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 GALTP07902 379 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 TFPIP10646 304 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 BMP2P12643 396 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 PGAM2P15259 253 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 ACRV1P26436 265 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 HSD11B1P28845 292 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 EIF2DP41214 584 aaKnown RBP7.52□□□□□ -1.21
VPS13D-211ENST00000543710 MAGEA2P43356 314 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 RPP30P78346 268 aaKnown RBP7.52□□□□□ -1.21
VPS13D-211ENST00000543710 MZT1Q08AG7 82 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 CAMK2DQ13557 499 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 KCNJ8Q15842 424 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 OCLNQ16625 522 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 FAM182AQ5T1J6 154 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 ADGRF1Q5T601 910 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 WDR53Q7Z5U6 358 aaPredicted RBP7.52□□□□□ -1.21
VPS13D-211ENST00000543710 ZNF431Q8TF32 576 aaPredicted RBP7.52□□□□□ -1.21
VPS13D-211ENST00000543710 HSH2DQ96JZ2 352 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 CD180Q99467 661 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 PBX4Q9BYU1 374 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 EMC3Q9P0I2 261 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 FKBPLQ9UIM3 349 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 NUBP2Q9Y5Y2 271 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 CDC14CA4D256 554 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 HTR3EA5X5Y0 456 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 STMND1H3BQB6 276 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 PRRG2O14669 202 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 MT-CO1P00395 513 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 TAL1P17542 331 aaPredicted RBP7.52□□□□□ -1.21
VPS13D-211ENST00000543710 AVPR2P30518 371 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 PCBP4P57723 403 aaKnown RBP7.52□□□□□ -1.21
VPS13D-211ENST00000543710 ENPP2Q13822 863 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 FAM174BQ3ZCQ3 159 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 RFWD3Q6PCD5 774 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 FIGLAQ6QHK4 219 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 MMAAQ8IVH4 418 aaKnown RBP7.52□□□□□ -1.21
VPS13D-211ENST00000543710 CPEB1Q9BZB8 566 aaKnown RBP7.52□□□□□ -1.21
VPS13D-211ENST00000543710 OR51E2Q9H255 320 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 ZNF69Q9UC07 566 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 SLC7A8Q9UHI5 535 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 HS3ST4Q9Y661 456 aa7.52□□□□□ -1.21
VPS13D-211ENST00000543710 LINC01553A4QN01 128 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 M0R129 80 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 TSPAN6O43657 245 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 ERAL1O75616 437 aaKnown RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 PSKH1P11801 424 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 ACPPP15309 386 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 PORP16435 677 aaPredicted RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 FOXN2P32314 431 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 GPX6P59796 221 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 CXCR4P61073 352 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 CDK6Q00534 326 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 MRPL49Q13405 166 aaKnown RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 C1orf94Q6P1W5 598 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 ASB18Q6ZVZ8 466 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 ESX1Q8N693 406 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 OR2L5Q8NG80 312 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 PPM1MQ96MI6 270 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 PBDC1Q9BVG4 233 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 TXLNGYQ9BZA5 131 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 SLC6A16Q9GZN6 736 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 AIG1Q9NVV5 245 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 ABCD2Q9UBJ2 740 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 POLHQ9Y253 713 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 MYH15Q9Y2K3 1946 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 A0A1W2PRQ8 180 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 HTRA2O43464 458 aaPredicted RBP7.51□□□□□ -1.21
VPS13D-211ENST00000543710 FAM155BO75949 473 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 PRLP01236 227 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 OTX2P32243 289 aa7.51□□□□□ -1.21
VPS13D-211ENST00000543710 RYKP34925 604 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms