RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 V9GYH0 126 aa13.11□□□□□ -0.31
VPS33A-208ENST00000543633 J3KTA2 159 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 FAAHO00519 579 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 CTDSP2O14595 271 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 SEC14L5O43304 696 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 SLC16A8O95907 504 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 DNTTP04053 509 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 CTSAP10619 480 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 UQCRC2P22695 453 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 TCEA1P23193 301 aaKnown RBP13.1□□□□□ -0.31
VPS33A-208ENST00000543633 RCVRNP35243 200 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 RUNX1T1Q06455 604 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 OCLNQ16625 522 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 BCL7AQ4VC05 210 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 REEP3Q6NUK4 255 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 DPY19L3Q6ZPD9 716 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 SIMC1Q8NDZ2 872 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 PROKR2Q8NFJ6 384 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 ASB15Q8WXK1 588 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 MRPS31Q92665 395 aaKnown RBP13.1□□□□□ -0.31
VPS33A-208ENST00000543633 PDXPQ96GD0 296 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 TEFMQ96QE5 360 aaKnown RBP13.1□□□□□ -0.31
VPS33A-208ENST00000543633 ROGDIQ9GZN7 287 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 SYNDIG1Q9H7V2 258 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 A4GALTQ9NPC4 353 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 PRDM8Q9NQV8 689 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 TAS2R16Q9NYV7 291 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 CFAP97Q9P2B7 532 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 TMCC3Q9ULS5 477 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 DYRK1BQ9Y463 629 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 N6AMT1Q9Y5N5 214 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 HMX3A6NHT5 357 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 A8MU76 341 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 TBX19O60806 448 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 PDE9AO76083 593 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 RECKO95980 971 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 IL1AP01583 271 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 CTSOP43234 321 aaPredicted RBP13.1□□□□□ -0.31
VPS33A-208ENST00000543633 BDKRB1P46663 353 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 NKX2-5P52952 324 aaPredicted RBP13.1□□□□□ -0.31
VPS33A-208ENST00000543633 SMIM11AP58511 58 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 ASAH1Q13510 395 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 C1DQ13901 141 aaKnown RBP13.1□□□□□ -0.31
VPS33A-208ENST00000543633 SPHARQ15513 63 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 SLC5A12Q1EHB4 618 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 MPEG1Q2M385 716 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 ARMC4Q5T2S8 1044 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 HIST2H2AA3Q6FI13 130 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 FBXO46Q6PJ61 603 aaPredicted RBP13.1□□□□□ -0.31
VPS33A-208ENST00000543633 ANKRD33Q7Z3H0 272 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 VN1R5Q7Z5H4 357 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 TMPRSS11BQ86T26 416 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 OR8H2Q8N162 312 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 CLDN22Q8N7P3 220 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 ZNF557Q8N988 423 aaPredicted RBP13.1□□□□□ -0.31
VPS33A-208ENST00000543633 OR8J1Q8NGP2 316 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 BTN2A2Q8WVV5 523 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 NEIL2Q969S2 332 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 UBE2E3Q969T4 207 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 KCNS3Q9BQ31 491 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 SGPP1Q9BX95 441 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 SRRQ9GZT4 340 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 MIR1-1HGQ9H1L0 117 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 EPHX3Q9H6B9 360 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 ERVK13-1Q9NX77 482 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 CD84Q9UIB8 345 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 CMAHPQ9Y471 501 aa13.1□□□□□ -0.31
VPS33A-208ENST00000543633 A0A1W2PRB8 838 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 M0R129 80 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 TSPAN6O43657 245 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 SCO2O43819 266 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 ENTPD6O75354 484 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 CSO75390 466 aaKnown RBP13.09□□□□□ -0.31
VPS33A-208ENST00000543633 GASTP01350 101 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 ADRA2AP08913 450 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 C1GALT1C1LP0DN25 315 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 MAGP20916 626 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 CRYBB2P43320 205 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 ALDH6A1Q02252 535 aaKnown RBP13.09□□□□□ -0.31
VPS33A-208ENST00000543633 C2orf80Q0P641 193 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 ZNF284Q2VY69 593 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 ZFP69Q49AA0 526 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 SLC25A30Q5SVS4 291 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 MFSD4BQ5TF39 518 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 ERAP2Q6P179 960 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 SLC39A5Q6ZMH5 540 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 SPATC1Q76KD6 591 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 ARMCX6Q7L4S7 300 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 HSD11B1LQ7Z5J1 315 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 HS6ST3Q8IZP7 471 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 NANOGP1Q8N7R0 232 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 ARMC5Q96C12 935 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 NLNQ9BYT8 704 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 BARHL1Q9BZE3 327 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 REV1Q9UBZ9 1251 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 SSR3Q9UNL2 185 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 SNX8Q9Y5X2 465 aa13.09□□□□□ -0.31
VPS33A-208ENST00000543633 CARNS1A5YM72 827 aa13.08□□□□□ -0.31
VPS33A-208ENST00000543633 TPST2O60704 377 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms