RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 TMEM52Q8NDY8 209 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 METTL21AQ8WXB1 218 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 C11orf24Q96F05 449 aaPredicted RBP16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 APIPQ96GX9 242 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 VPS50Q96JG6 964 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 MED4Q9NPJ6 270 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 PRDM9Q9NQV7 894 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 INTS9Q9NV88 658 aaKnown RBP16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 SIRT5Q9NXA8 310 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 P4HTMQ9NXG6 502 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 MAN2B2Q9Y2E5 1009 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 ATG4BQ9Y4P1 393 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 PTGDR2Q9Y5Y4 395 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 NUP210LQ5VU65 1888 aa16.1■□□□□ 0.17
RABGGTA-203ENST00000543002 LOC102723996A0A087X1L8 192 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 A0A1W2PQ72 361 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 BLACEA4D250 179 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 CLDN4O14493 209 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 KLF11O14901 512 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 PIP5K1BO14986 540 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 PROM1O43490 865 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 RGS14O43566 566 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 LINC00032P0C843 101 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 PRPH2P23942 346 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 RPL14P50914 215 aaKnown RBP16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 HNRNPFP52597 415 aaKnown RBP16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 HSD17B7P56937 341 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 BTG2P78543 158 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 BTKQ06187 659 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 NSDHLQ15738 373 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 GALNT18Q6P9A2 607 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 Q6ZSR9 355 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 SCUBE1Q8IWY4 988 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 DDIASQ8IXT1 998 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 OR2T11Q8NH01 316 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 ZNF75CPQ92670 426 aaPredicted RBP16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 METTL2AQ96IZ6 378 aaKnown RBP16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 PTCHD1Q96NR3 888 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 CCT7Q99832 543 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 MESP1Q9BRJ9 268 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 PRTFDC1Q9NRG1 225 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 MCM8Q9UJA3 840 aa16.09■□□□□ 0.17
RABGGTA-203ENST00000543002 IGKV3D-11A0A0A0MRZ8 115 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 A0A1W2PR48 441 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 ITGB2P05107 769 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 ACPPP15309 386 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 TLX1P31314 330 aaPredicted RBP16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 BUD31P41223 144 aaPredicted RBP16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 MAPK12P53778 367 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 RAE1P78406 368 aaKnown RBP16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 TNFRSF17Q02223 184 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 TBR1Q16650 682 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 LANCL3Q6ZV70 420 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 ANKRD37Q7Z713 158 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 TMEM102Q8N9M5 508 aaPredicted RBP16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 OR11G2Q8NGC1 345 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 APOBEC4Q8WW27 367 aaKnown RBP16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 TSLPQ969D9 159 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 C8orf44Q96CB5 159 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 PFDN4Q9NQP4 134 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 NECTIN3Q9NQS3 549 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 C19orf25Q9UFG5 118 aaPredicted RBP16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 FBXL4Q9UKA2 621 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 KCNMB2Q9Y691 235 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 LAMA5O15230 3695 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 PCSK5Q92824 1860 aa16.08■□□□□ 0.16
RABGGTA-203ENST00000543002 TCRBV16S1A1N1A0A5B0 115 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 ARGFXA6NJG6 315 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 PCDH7O60245 1069 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 CTNSO60931 367 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 GUCY1B2O75343 617 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 MAOAP21397 527 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 TIA1P31483 386 aaKnown RBP eCLIP16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 RRADP55042 308 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 TRA2BP62995 288 aaKnown RBP16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 OCRLQ01968 901 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 RHDQ02161 417 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 SLC13A2Q13183 592 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 NR6A1Q15406 480 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 XKR7Q5GH72 579 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 DCAF10Q5QP82 559 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 C18orf63Q68DL7 685 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 BORAQ6PGQ7 559 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 CPEB2Q7Z5Q1 589 aaKnown RBP16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 APLFQ8IW19 511 aaPredicted RBP16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 FAM76AQ8TAV0 307 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 DYDC1Q8WWB3 177 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 FER1L6-AS2Q96M78 137 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 ZNF700Q9H0M5 742 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 RPF2Q9H7B2 306 aaKnown RBP16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 WDR41Q9HAD4 459 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 LRTM1Q9HBL6 345 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 PNPOQ9NVS9 261 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 C1orf109Q9NX04 203 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 TEX10Q9NXF1 929 aaPredicted RBP16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 CLDN16Q9Y5I7 305 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 MGAQ8IWI9 3026 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 CACNA1BQ00975 2339 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 SCN2AQ99250 2005 aa16.07■□□□□ 0.16
RABGGTA-203ENST00000543002 IGHV1-45A0A0A0MS14 117 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms