RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 DIDO1Q9BTC0 2240 aaKnown RBP16.29■□□□□ 0.2
LTBR-210ENST00000542830 ASPDHA6ND91 283 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 CYSRT1A8MQ03 144 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 POC1B-GALNT4F8VUJ3 575 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 TGFBR3LH3BV60 316 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 LRRTM2O43300 516 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 NEURL1O76050 574 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 IFNA16P05015 189 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 SP1P08047 785 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 RAP1GDS1P52306 607 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 DDX39BQ13838 428 aaKnown RBP16.29■□□□□ 0.2
LTBR-210ENST00000542830 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.29■□□□□ 0.2
LTBR-210ENST00000542830 LGSNQ5TDP6 509 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 GOLGA7Q7Z5G4 137 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 CLNKQ7Z7G1 428 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 IFT20Q8IY31 132 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 NCLNQ969V3 563 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 TMEM125Q96AQ2 219 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 TRIM44Q96DX7 344 aaPredicted RBP16.29■□□□□ 0.2
LTBR-210ENST00000542830 MAPKAP1Q9BPZ7 522 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 ALOXE3Q9BYJ1 711 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 OR51B5Q9H339 312 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 IPPKQ9H8X2 491 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 VTI1BQ9UEU0 232 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 FBXW2Q9UKT8 454 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 CLCA3PQ9Y6N3 262 aa16.29■□□□□ 0.2
LTBR-210ENST00000542830 STX16-NPEPL1H3BU86 382 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 RTCAO00442 366 aaKnown RBP16.28■□□□□ 0.2
LTBR-210ENST00000542830 STX16O14662 325 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 SMIM24O75264 130 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 SH3BGRLO75368 114 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 SLC25A12O75746 678 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 ZFAND5O76080 213 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 ABHD2P08910 425 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 CPN2P22792 545 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 PTX3P26022 381 aaPredicted RBP16.28■□□□□ 0.2
LTBR-210ENST00000542830 MST1P26927 711 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 PPP2R1BP30154 601 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 HLCSP50747 726 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 GPR143P51810 404 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 KCNK10P57789 538 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 PMP22Q01453 160 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 OR4C11Q6IEV9 310 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 MAMDC2Q7Z304 686 aaPredicted RBP16.28■□□□□ 0.2
LTBR-210ENST00000542830 GALNTL5Q7Z4T8 443 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 CNPY4Q8N129 248 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 ZCCHC7Q8N3Z6 543 aaKnown RBP16.28■□□□□ 0.2
LTBR-210ENST00000542830 PTGR2Q8N8N7 351 aaPredicted RBP16.28■□□□□ 0.2
LTBR-210ENST00000542830 L3MBTL4Q8NA19 623 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 MORN4Q8NDC4 146 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 OR14A16Q8NHC5 309 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 DCAKDQ8WVC6 231 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 SCYL1Q96KG9 808 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 MTERF1Q99551 399 aaKnown RBP16.28■□□□□ 0.2
LTBR-210ENST00000542830 HES7Q9BYE0 225 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 PSD3Q9NYI0 1048 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 XPR1Q9UBH6 696 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 PHF11Q9UIL8 331 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 NAV2Q8IVL1 2488 aa16.28■□□□□ 0.2
LTBR-210ENST00000542830 EXOC1LA0A1B0GW35 172 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 A1L4Q6 167 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 LRRC14BA6NHZ5 514 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 TRIM49D1C9J1S8 452 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 SAP18O00422 153 aaKnown RBP16.27■□□□□ 0.2
LTBR-210ENST00000542830 UNC5CO95185 931 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 SIX3O95343 332 aaPredicted RBP16.27■□□□□ 0.2
LTBR-210ENST00000542830 SNRPAP09012 282 aaKnown RBP16.27■□□□□ 0.2
LTBR-210ENST00000542830 ST13P50502 369 aaKnown RBP16.27■□□□□ 0.2
LTBR-210ENST00000542830 RPS13P62277 151 aaKnown RBP16.27■□□□□ 0.2
LTBR-210ENST00000542830 ALDH6A1Q02252 535 aaKnown RBP16.27■□□□□ 0.2
LTBR-210ENST00000542830 SLAMF1Q13291 335 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 BIKQ13323 160 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 CPSF6Q16630 551 aaKnown RBP eCLIP16.27■□□□□ 0.2
LTBR-210ENST00000542830 MAPKAPK3Q16644 382 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 KRTCAP3Q53RY4 240 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 C10orf62Q5T681 223 aaPredicted RBP16.27■□□□□ 0.2
LTBR-210ENST00000542830 ZNF468Q5VIY5 522 aaPredicted RBP16.27■□□□□ 0.2
LTBR-210ENST00000542830 TRMT10CQ7L0Y3 403 aaKnown RBP16.27■□□□□ 0.2
LTBR-210ENST00000542830 TMEM156Q8N614 296 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 UHMK1Q8TAS1 419 aaKnown RBP16.27■□□□□ 0.2
LTBR-210ENST00000542830 THAP3Q8WTV1 239 aaPredicted RBP16.27■□□□□ 0.2
LTBR-210ENST00000542830 RELTQ969Z4 430 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 ATP6V1E2Q96A05 226 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 PHF21BQ96EK2 531 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 MRPL57Q9BQC6 102 aaKnown RBP16.27■□□□□ 0.2
LTBR-210ENST00000542830 ZNF358Q9NW07 568 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 ZNF223Q9UK11 482 aaPredicted RBP16.27■□□□□ 0.2
LTBR-210ENST00000542830 PPT2Q9UMR5 302 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 NFU1Q9UMS0 254 aa16.27■□□□□ 0.2
LTBR-210ENST00000542830 MAST4O15021 2626 aa16.26■□□□□ 0.19
LTBR-210ENST00000542830 FOXE1O00358 373 aaPredicted RBP16.26■□□□□ 0.19
LTBR-210ENST00000542830 PLPP1O14494 284 aa16.26■□□□□ 0.19
LTBR-210ENST00000542830 NME2P1O60361 137 aa16.26■□□□□ 0.19
LTBR-210ENST00000542830 ITGA10O75578 1167 aa16.26■□□□□ 0.19
LTBR-210ENST00000542830 CLDN9O95484 217 aa16.26■□□□□ 0.19
LTBR-210ENST00000542830 TNNI3P19429 210 aa16.26■□□□□ 0.19
LTBR-210ENST00000542830 NME2P22392 152 aa16.26■□□□□ 0.19
LTBR-210ENST00000542830 TLX1P31314 330 aaPredicted RBP16.26■□□□□ 0.19
LTBR-210ENST00000542830 ARL1P40616 181 aaPredicted RBP16.26■□□□□ 0.19
LTBR-210ENST00000542830 CCNG1P51959 295 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms