RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 ASCL3Q9NQ33 180 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 ETNK2Q9NVF9 386 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 FBXO9Q9UK97 447 aaPredicted RBP7.85□□□□□ -1.15
MRPS35-204ENST00000542199 FAM96BQ9Y3D0 163 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 OR1A2Q9Y585 309 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 BZW2Q9Y6E2 419 aaKnown RBP7.85□□□□□ -1.15
MRPS35-204ENST00000542199 HECTD1Q9ULT8 2610 aa7.85□□□□□ -1.15
MRPS35-204ENST00000542199 NTN3O00634 580 aaPredicted RBP7.84□□□□□ -1.15
MRPS35-204ENST00000542199 CASC3O15234 703 aaKnown RBP7.84□□□□□ -1.15
MRPS35-204ENST00000542199 LIASO43766 372 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 SOCS5O75159 536 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 SEC14L2O76054 403 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 RECQL5O94762 991 aaPredicted RBP7.84□□□□□ -1.15
MRPS35-204ENST00000542199 TFP02787 698 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 PCCBP05166 539 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 CYP1A2P05177 515 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 HOXC4P09017 264 aaPredicted RBP7.84□□□□□ -1.15
MRPS35-204ENST00000542199 ALPIP09923 528 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 ITGAXP20702 1163 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 HSPA9P38646 679 aaKnown RBP7.84□□□□□ -1.15
MRPS35-204ENST00000542199 PDX1P52945 283 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 PMS2P54278 862 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 ERVPABLB-1P60509 514 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 SRP54P61011 504 aaKnown RBP7.84□□□□□ -1.15
MRPS35-204ENST00000542199 POLR2LP62875 67 aaKnown RBP7.84□□□□□ -1.15
MRPS35-204ENST00000542199 SLC25A11Q02978 314 aaKnown RBP7.84□□□□□ -1.15
MRPS35-204ENST00000542199 GPR18Q14330 331 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 PIGHQ14442 188 aaPredicted RBP7.84□□□□□ -1.15
MRPS35-204ENST00000542199 ELOCQ15369 112 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 DCAF12L2Q5VW00 463 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 TXNRD3NBQ6F5E7 133 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 ZNF425Q6IV72 752 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 TMCO3Q6UWJ1 677 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 Q6ZSV7 163 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 LSMEM2Q8N112 164 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 PARP16Q8N5Y8 322 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 TEKT4Q8WW24 435 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 TSACCQ96A04 125 aaPredicted RBP7.84□□□□□ -1.15
MRPS35-204ENST00000542199 INTS12Q96CB8 462 aaKnown RBP7.84□□□□□ -1.15
MRPS35-204ENST00000542199 PDXPQ96GD0 296 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 ATXN7L3BQ96GX2 97 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 URB1-AS1Q96HZ7 61 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 CCDC3Q9BQI4 270 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 MGME1Q9BQP7 344 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 ITPAQ9BY32 194 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 THAP2Q9H0W7 228 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.84□□□□□ -1.15
MRPS35-204ENST00000542199 POT1Q9NUX5 634 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 ANKRD10Q9NXR5 420 aa7.84□□□□□ -1.15
MRPS35-204ENST00000542199 MYLKQ15746 1914 aa7.84□□□□□ -1.16
MRPS35-204ENST00000542199 A0A087X0T9 212 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 SYCE3A1L190 88 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 TMEM202A6NGA9 273 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 CACNB4O00305 520 aaPredicted RBP7.83□□□□□ -1.16
MRPS35-204ENST00000542199 SERPING1P05155 500 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 FAM228BP0C875 321 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 PCNAP12004 261 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 IL4RP24394 825 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 BSGP35613 385 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 NR4A2P43354 598 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 RASSF2P50749 326 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 OLR1P78380 273 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 ZBED6P86452 979 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 CCDC173Q0VFZ6 552 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 ZNF235Q14590 738 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 GSTA3Q16772 222 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 HIST2H2ACQ16777 129 aaPredicted RBP7.83□□□□□ -1.16
MRPS35-204ENST00000542199 TDRD12Q587J7 1177 aaKnown RBP7.83□□□□□ -1.16
MRPS35-204ENST00000542199 ENPP7Q6UWV6 458 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 Q6ZTK2 550 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 LUZP1Q86V48 1076 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 GKN2Q86XP6 184 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 LRRC49Q8IUZ0 686 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 PELI3Q8N2H9 469 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 PGBD5Q8N414 524 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 ATPAF2Q8N5M1 289 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 TEX45Q8NA69 505 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 ZNF248Q8NDW4 579 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 OR56A4Q8NGH8 313 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 OR1E3Q8WZA6 343 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 MCCC1Q96RQ3 725 aaPredicted RBP7.83□□□□□ -1.16
MRPS35-204ENST00000542199 NUDCD1Q96RS6 583 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 H2AFJQ9BTM1 129 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 NUP85Q9BW27 656 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 WDR26Q9H7D7 661 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 FGF22Q9HCT0 170 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 KRCC1Q9NPI7 259 aaPredicted RBP7.83□□□□□ -1.16
MRPS35-204ENST00000542199 RCOR3Q9P2K3 495 aaPredicted RBP7.83□□□□□ -1.16
MRPS35-204ENST00000542199 ANAPC7Q9UJX3 599 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 NENFQ9UMX5 172 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 SATB2Q9UPW6 733 aa7.83□□□□□ -1.16
MRPS35-204ENST00000542199 LSM4Q9Y4Z0 139 aaKnown RBP7.83□□□□□ -1.16
MRPS35-204ENST00000542199 UBR5O95071 2799 aaPredicted RBP7.83□□□□□ -1.16
MRPS35-204ENST00000542199 SPENQ96T58 3664 aaKnown RBP7.83□□□□□ -1.16
MRPS35-204ENST00000542199 COL27A1Q8IZC6 1860 aaPredicted RBP7.83□□□□□ -1.16
MRPS35-204ENST00000542199 A0A1W2PQ67 120 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 RGS11O94810 467 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 MT-CYBP00156 380 aaPredicted RBP7.82□□□□□ -1.16
MRPS35-204ENST00000542199 TNFP01375 233 aa7.82□□□□□ -1.16
MRPS35-204ENST00000542199 GYPCP04921 128 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms