RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TMEM26Q6ZUK4 368 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 LAS2Q8IYD9 372 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 CFAP206Q8IYR0 622 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 RASGEF1CQ8N431 466 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 RASGEF1AQ8N9B8 481 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 PPHLN1Q8NEY8 458 aaKnown RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 OR52K1Q8NGK4 314 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 OR13C4Q8NGS5 318 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 OR2L2Q8NH16 312 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 GRK7Q8WTQ7 553 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 ZFPM2Q8WW38 1151 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 KCNE4Q8WWG9 221 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 PATE1Q8WXA2 126 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 NCSTNQ92542 709 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 PEX13Q92968 403 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 MAGOHBQ96A72 148 aaKnown RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 SGF29Q96ES7 293 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 TRMT61AQ96FX7 289 aaKnown RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 LINC00615Q96LM1 132 aaPredicted RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 RANBP9Q96S59 729 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 TIMP4Q99727 224 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 TSSK1BQ9BXA7 367 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 MED4Q9NPJ6 270 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 EIF2B3Q9NR50 452 aaKnown RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 IRAK4Q9NWZ3 460 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 BFARQ9NZS9 450 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 SLC23A2Q9UGH3 650 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 TTC7AQ9ULT0 858 aaPredicted RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 LOXL2Q9Y4K0 774 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 HEBP2Q9Y5Z4 205 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 COPG1Q9Y678 874 aaKnown RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 SIRT4Q9Y6E7 314 aaPredicted RBP5.19□□□□□ -1.58
CPSF7-220ENST00000541963 KNTC1P50748 2209 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 CACNA1AO00555 2505 aa5.19□□□□□ -1.58
CPSF7-220ENST00000541963 GOLGA4Q13439 2230 aaKnown RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 IGHV5-10-1A0A0J9YXX1 117 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 MAGEB16A2A368 324 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 A6NCN8 305 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 LILRA5A6NI73 299 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 TARM1B6A8C7 271 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 POC1B-GALNT4F8VUJ3 575 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 PGRMC1O00264 195 aaKnown RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 NVLO15381 856 aaKnown RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 TOX3O15405 576 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 KLK10O43240 276 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 GUCY1B2O75343 617 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 KRT14P02533 472 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 FTH1P02794 183 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 SLC35G4P0C7Q5 338 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 OR56A5P0C7T3 313 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 ZSCAN5DPP0CG00 497 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 PEPDP12955 493 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 ETS1P14921 441 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 TCP1P17987 556 aaKnown RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 TNFRSF1AP19438 455 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 WT1P19544 449 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 TPSB2P20231 275 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 NDUFS1P28331 727 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 PBLDP30039 288 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 PGM1P36871 562 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 KCNJ1P48048 391 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 HNRNPH2P55795 449 aaKnown RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 FOXL2P58012 376 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 UBE2IP63279 158 aaKnown RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 PRAMEP78395 509 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 PLOD1Q02809 727 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 OLIG2Q13516 323 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 ITIH4Q14624 930 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 LARS2Q15031 903 aaKnown RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 SIX1Q15475 284 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 TPSAB1Q15661 275 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 FASTKD1Q53R41 847 aaKnown RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 NKAIN2Q5VXU1 208 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 ARMC3Q5W041 872 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 LRRC8BQ6P9F7 803 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 CCDC137Q6PK04 289 aaKnown RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 AFTPHQ6ULP2 937 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 DET1Q7L5Y6 550 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 MAATS1Q7Z4T9 603 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 PCGF5Q86SE9 256 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 SDCCAG8Q86SQ7 713 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 SERPINA9Q86WD7 417 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 ZNF547Q8IVP9 402 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 SFTPA2Q8IWL1 248 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 UEVLDQ8IX04 471 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 SLC35F6Q8N357 371 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 GALNT4Q8N4A0 578 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 AMER2Q8N7J2 671 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 ENDOVQ8N8Q3 282 aaKnown RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 OR4L1Q8NH43 312 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 HM13Q8TCT9 377 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 ACTRT1Q8TDG2 376 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 KCNJ9Q92806 393 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 ZNF764Q96H86 408 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 DNAJC1Q96KC8 554 aaKnown RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 C16orf45Q96MC5 204 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 RUNDC3BQ96NL0 473 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 BBC3Q96PG8 261 aaPredicted RBP5.18□□□□□ -1.58
CPSF7-220ENST00000541963 NPAS1Q99742 590 aa5.18□□□□□ -1.58
CPSF7-220ENST00000541963 MACROD1Q9BQ69 325 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms